RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 PPEF2O14830 753 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 SLC16A3O15427 465 aaKnown RBP21.02■□□□□ 0.96
SLX1A-204ENST00000563995 GALR2O43603 387 aaPredicted RBP21.02■□□□□ 0.96
SLX1A-204ENST00000563995 TRAPPC3O43617 180 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 TNNI1P19237 187 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 BRCC3P46736 316 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 STX17P56962 302 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 SMC1AQ14683 1233 aaKnown RBP21.02■□□□□ 0.96
SLX1A-204ENST00000563995 DUOXA2Q1HG44 320 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 CAVIN1Q6NZI2 390 aaKnown RBP21.02■□□□□ 0.96
SLX1A-204ENST00000563995 INTS8Q75QN2 995 aaKnown RBP21.02■□□□□ 0.96
SLX1A-204ENST00000563995 MRPL43Q8N983 215 aaKnown RBP21.02■□□□□ 0.96
SLX1A-204ENST00000563995 KREMEN2Q8NCW0 462 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 TMC2Q8TDI7 906 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 SYAP1Q96A49 352 aaPredicted RBP21.02■□□□□ 0.96
SLX1A-204ENST00000563995 EEF2KMTQ96G04 330 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 ADAM7Q9H2U9 754 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 CHST7Q9NS84 486 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 RWDD2AQ9UIY3 292 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 ITGA11Q9UKX5 1188 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 NUB1Q9Y5A7 615 aa21.02■□□□□ 0.96
SLX1A-204ENST00000563995 LRRIQ3A6PVS8 624 aaPredicted RBP21.01■□□□□ 0.95
SLX1A-204ENST00000563995 C2CD4DB7Z1M9 353 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 CLASP2O75122 1294 aaKnown RBP21.01■□□□□ 0.95
SLX1A-204ENST00000563995 TNNC2P02585 160 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 ITGB3P05106 788 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 URODP06132 367 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 EPB41P11171 864 aaKnown RBP21.01■□□□□ 0.95
SLX1A-204ENST00000563995 AARSP49588 968 aaKnown RBP eCLIP21.01■□□□□ 0.95
SLX1A-204ENST00000563995 CLDN10P78369 228 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 ITIH3Q06033 890 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 ENPEPQ07075 957 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 PTPN14Q15678 1187 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 USP41Q3LFD5 358 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 CXorf38Q8TB03 319 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 CEP63Q96MT8 703 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 NECTIN4Q96NY8 510 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 DACH1Q9UI36 760 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 SORCS3Q9UPU3 1222 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 IRAK3Q9Y616 596 aa21.01■□□□□ 0.95
SLX1A-204ENST00000563995 KRT13P13646 458 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 PAX3P23760 479 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 POLR2BP30876 1174 aaKnown RBP21■□□□□ 0.95
SLX1A-204ENST00000563995 GLUD2P49448 558 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 VAMP7P51809 220 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 DLG4P78352 724 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 DSG1Q02413 1049 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 BFSP1Q12934 665 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 MTMR3Q13615 1198 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 FAM171A1Q5VUB5 890 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 PDZRN4Q6ZMN7 1036 aaPredicted RBP21■□□□□ 0.95
SLX1A-204ENST00000563995 USP37Q86T82 979 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 CSGALNACT2Q8N6G5 542 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 AUTS2Q8WXX7 1259 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 ZNF516Q92618 1163 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 BORCS6Q96GS4 357 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 SUSD3Q96L08 255 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 B3GALT6Q96L58 329 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 ZNF560Q96MR9 790 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 TTPALQ9BTX7 342 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 MRPL17Q9NRX2 175 aaKnown RBP21■□□□□ 0.95
SLX1A-204ENST00000563995 SIX4Q9UIU6 781 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 SSX2IPQ9Y2D8 614 aa21■□□□□ 0.95
SLX1A-204ENST00000563995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.99■□□□□ 0.95
SLX1A-204ENST00000563995 I3L4J1 428 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 LILRB3O75022 631 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 CXCL14O95715 111 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 FGFR3P22607 806 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 CA8P35219 290 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 AP3M2P53677 418 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 LILRA4P59901 499 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 MCCD1P59942 119 aaPredicted RBP20.99■□□□□ 0.95
SLX1A-204ENST00000563995 RTP2Q5QGT7 225 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 KIAA0319Q5VV43 1072 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 KIAA1841Q6NSI8 718 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 CES5AQ6NT32 575 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 SASS6Q6UVJ0 657 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 TRAPPC11Q7Z392 1133 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 FILIP1Q7Z7B0 1213 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 GPR65Q8IYL9 337 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 UBALD2Q8IYN6 164 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 NKD2Q969F2 451 aaPredicted RBP20.99■□□□□ 0.95
SLX1A-204ENST00000563995 SMOC2Q9H3U7 446 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 AGAP1Q9UPQ3 857 aa20.99■□□□□ 0.95
SLX1A-204ENST00000563995 IKBKBO14920 756 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 SYN3O14994 580 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 KRT19P08727 400 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 TKTP29401 623 aaKnown RBP20.98■□□□□ 0.95
SLX1A-204ENST00000563995 PNPLA4P41247 253 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 TAF6P49848 677 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 RBP5P82980 135 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 CT47A1Q5JQC4 288 aaPredicted RBP20.98■□□□□ 0.95
SLX1A-204ENST00000563995 C1orf220Q5T0J3 134 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 SCARA3Q6AZY7 606 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 CEP57Q86XR8 500 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 LRRC52Q8N7C0 313 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 MED15Q96RN5 788 aa20.98■□□□□ 0.95
SLX1A-204ENST00000563995 M0QZQ0 153 aa20.97■□□□□ 0.95
SLX1A-204ENST00000563995 C2CD2LO14523 706 aa20.97■□□□□ 0.95
SLX1A-204ENST00000563995 SPTLC1O15269 473 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms