RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 SPTLC1O15269 473 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 LRRN2O75325 713 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 OR4Q2P0C623 313 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 IDEP14735 1019 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 GLULP15104 373 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 GAP43P17677 238 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 RPS9P46781 194 aaKnown RBP10.34□□□□□ -0.75
CLN6-203ENST00000563917 ID4P47928 161 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 AARSP49588 968 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLN6-203ENST00000563917 ACOT2P49753 483 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 TAF6P49848 677 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 GUCY2FP51841 1108 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 NRLP54845 237 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 LILRA4P59901 499 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 POU5F1Q01860 360 aaKnown RBP10.34□□□□□ -0.75
CLN6-203ENST00000563917 GRM2Q14416 872 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 TEAD2Q15562 447 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 SV2CQ496J9 727 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 C9orf57Q5W0N0 161 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 DYMQ7RTS9 669 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 NT5DC4Q86YG4 428 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 MFSD6LQ8IWD5 586 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 RUBCNQ92622 972 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 ZNF560Q96MR9 790 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 ACCSQ96QU6 501 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 SEPT5Q99719 369 aaPredicted RBP10.34□□□□□ -0.75
CLN6-203ENST00000563917 PLA2G2FQ9BZM2 168 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 HAPLN2Q9GZV7 340 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 ST6GALNAC4Q9H4F1 302 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 DPP3Q9NY33 737 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 NCDNQ9UBB6 729 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 HSFX1Q9UBD0 423 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 PCDHGA2Q9Y5H1 932 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 SRPRBQ9Y5M8 271 aaKnown RBP10.34□□□□□ -0.75
CLN6-203ENST00000563917 MIA3Q5JRA6 1907 aa10.34□□□□□ -0.75
CLN6-203ENST00000563917 PDCD11Q14690 1871 aaKnown RBP10.34□□□□□ -0.75
CLN6-203ENST00000563917 A0A1W2PRU2 124 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 MTMR11A4FU01 709 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 CYB561D2O14569 222 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 MEFVO15553 781 aaPredicted RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 GCNT3O95395 438 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 LDHAP00338 332 aaKnown RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 ADRB2P07550 413 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 NFICP08651 508 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 GJA1P17302 382 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 TARSP26639 723 aaKnown RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 PNPLA4P41247 253 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 STAT6P42226 847 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 KPNA1P52294 538 aaPredicted RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 EPHA5P54756 1037 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 CEBPZQ03701 1054 aaKnown RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 ALCAMQ13740 583 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 MGAT5BQ3V5L5 792 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 SLC39A12Q504Y0 691 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 ZC2HC1CQ53FD0 456 aaPredicted RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 CENPPQ6IPU0 288 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 STXBP4Q6ZWJ1 553 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 ZNF720Q7Z2F6 126 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 SFR1Q86XK3 245 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 DCP1BQ8IZD4 617 aaKnown RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 NOC3LQ8WTT2 800 aaKnown RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 C2orf15Q8WU43 125 aaKnown RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 CACTINQ8WUQ7 758 aaKnown RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 FAM3CQ92520 227 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 PSMG2Q969U7 264 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 MSANTD3Q96H12 275 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 EPSTI1Q96J88 318 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 PYM1Q9BRP8 204 aaKnown RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 IER2Q9BTL4 223 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 FAM126AQ9BYI3 521 aaPredicted RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 LRRC27Q9C0I9 530 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 ATXN3LQ9H3M9 355 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 TRPV4Q9HBA0 871 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 ZNF334Q9HCZ1 680 aaPredicted RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 TRPV5Q9NQA5 729 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 ZSCAN32Q9NX65 697 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 RAB23Q9ULC3 237 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 SLC27A5Q9Y2P5 690 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 MTF2Q9Y483 593 aaPredicted RBP10.33□□□□□ -0.76
CLN6-203ENST00000563917 PIAS3Q9Y6X2 628 aa10.33□□□□□ -0.76
CLN6-203ENST00000563917 RIF1Q5UIP0 2472 aaKnown RBP10.32□□□□□ -0.76
CLN6-203ENST00000563917 FAM186AA6NE01 2351 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 HEPACAM2A8MVW5 462 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 PIRO00625 290 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 FCARP24071 287 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 CDC25CP30307 473 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 VIPR2P41587 438 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 CCR2P41597 374 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 TFAMQ00059 246 aaKnown RBP10.32□□□□□ -0.76
CLN6-203ENST00000563917 TSPY1Q01534 308 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 GRIN1Q05586 938 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 CUL4AQ13619 759 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 LRRC32Q14392 662 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 PTPAQ15257 358 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 SLC39A4Q6P5W5 647 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 VITQ6UXI7 678 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 ERMP1Q7Z2K6 904 aa10.32□□□□□ -0.76
CLN6-203ENST00000563917 DNAJB7Q7Z6W7 309 aaPredicted RBP10.32□□□□□ -0.76
CLN6-203ENST00000563917 KIAA2013Q8IYS2 634 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms