RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 GPIHBP1Q8IV16 184 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 SUSD3Q96L08 255 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 MRPL45Q9BRJ2 306 aaKnown RBP28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 BCO2Q9BYV7 579 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 AAASQ9NRG9 546 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 SPG21Q9NZD8 308 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 PCDHB12Q9Y5F1 795 aa28.94■■■□□ 2.22
SH3GL3-205ENST00000563901 PNMA6AP0CW24 399 aaPredicted RBP28.93■■■□□ 2.22
SH3GL3-205ENST00000563901 CD58P19256 250 aa28.93■■■□□ 2.22
SH3GL3-205ENST00000563901 RAPGEF1Q13905 1077 aa28.93■■■□□ 2.22
SH3GL3-205ENST00000563901 KLHL23Q8NBE8 558 aa28.93■■■□□ 2.22
SH3GL3-205ENST00000563901 CPLX3Q8WVH0 158 aa28.93■■■□□ 2.22
SH3GL3-205ENST00000563901 NAA15Q9BXJ9 866 aaKnown RBP28.93■■■□□ 2.22
SH3GL3-205ENST00000563901 TTYH3Q9C0H2 523 aa28.93■■■□□ 2.22
SH3GL3-205ENST00000563901 CERS4Q9HA82 394 aa28.93■■■□□ 2.22
SH3GL3-205ENST00000563901 ITIH6Q6UXX5 1313 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 M0QZQ0 153 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 HCRTO43612 131 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 TKTP29401 623 aaKnown RBP28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 BMPR1AP36894 532 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 FAM171A1Q5VUB5 890 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 WSCD1Q658N2 575 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 PDCL2Q8N4E4 241 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 TMEM169Q96HH4 297 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 MSRAQ9UJ68 235 aa28.92■■■□□ 2.22
SH3GL3-205ENST00000563901 SF3B1O75533 1304 aaKnown RBP eCLIP28.92■■■□□ 2.224e-7■■■■■ 87.5
SH3GL3-205ENST00000563901 FGF18O76093 207 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 RAB30Q15771 203 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 APPL2Q8NEU8 664 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 KBTBD7Q8WVZ9 684 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 NME7Q9Y5B8 376 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 HUS1O60921 280 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 EFEMP2O95967 443 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 GYPCP04921 128 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 P4HA1P13674 534 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 GCNT1Q02742 428 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 GOLGA8FQ08AF8 430 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 GOLGA8DPQ0D2H9 430 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 OSTM1Q86WC4 334 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 SPC24Q8NBT2 197 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 GPR88Q9GZN0 384 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 HMGXB4Q9UGU5 601 aa28.91■■■□□ 2.22
SH3GL3-205ENST00000563901 ODC1P11926 461 aa28.9■■■□□ 2.22
SH3GL3-205ENST00000563901 DNAJB2P25686 324 aa28.9■■■□□ 2.22
SH3GL3-205ENST00000563901 ORC1Q13415 861 aa28.9■■■□□ 2.22
SH3GL3-205ENST00000563901 LIMS2Q7Z4I7 341 aa28.9■■■□□ 2.22
SH3GL3-205ENST00000563901 CEP57Q86XR8 500 aa28.9■■■□□ 2.22
SH3GL3-205ENST00000563901 ADGRF2Q8IZF7 708 aa28.9■■■□□ 2.22
SH3GL3-205ENST00000563901 TOP6BLQ8N6T0 577 aa28.9■■■□□ 2.22
SH3GL3-205ENST00000563901 PCDHB8Q9UN66 801 aa28.9■■■□□ 2.22
SH3GL3-205ENST00000563901 CSPG5O95196 566 aa28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 TBXAS1P24557 533 aaPredicted RBP28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 PPM1AP35813 382 aa28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 PPP2R2DQ66LE6 453 aa28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 DRC7Q8IY82 874 aa28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 UBR7Q8N806 425 aa28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 ALG13Q9NP73 1137 aaKnown RBP28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 CISHQ9NSE2 258 aa28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 CEP72Q9P209 647 aa28.89■■■□□ 2.22
SH3GL3-205ENST00000563901 TRAPPC3O43617 180 aa28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 ACO1P21399 889 aaKnown RBP28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 CDC25BP30305 580 aa28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 FXR1P51114 621 aaKnown RBP eCLIP28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 MFAP3P55082 362 aa28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 DRAP1Q14919 205 aaPredicted RBP28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 RTP2Q5QGT7 225 aa28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 CACNA2D4Q7Z3S7 1137 aa28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 RNF168Q8IYW5 571 aaPredicted RBP28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 TGS1Q96RS0 853 aaKnown RBP28.88■■■□□ 2.21
SH3GL3-205ENST00000563901 CASP14P31944 242 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 BAP1Q92560 729 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 TWNKQ96RR1 684 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 COL4A4P53420 1690 aaPredicted RBP28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 ATG2AQ2TAZ0 1938 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 CALCAP01258 141 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 FGFR3P22607 806 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 JAM2P57087 298 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 ERVK-21P61565 698 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 TBX2Q13207 712 aaPredicted RBP28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 ZNF394Q53GI3 561 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 OR6B3Q8NGW1 331 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 NUP58Q9BVL2 599 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 CYP3A43Q9HB55 503 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 FBXL5Q9UKA1 691 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 RWDD3Q9Y3V2 267 aa28.87■■■□□ 2.21
SH3GL3-205ENST00000563901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.87■■■□□ 2.214e-6■■■□□ 18.8
SH3GL3-205ENST00000563901 F8VZ95 297 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 FOXN3O00409 490 aaPredicted RBP28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 CYP11A1P05108 521 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 LMO2P25791 158 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 USP8P40818 1118 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 SMAD3P84022 425 aaKnown RBP28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 FIGNQ5HY92 759 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 DDX53Q86TM3 631 aaKnown RBP28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 SHC3Q92529 594 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 TIFAQ96CG3 184 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 RTP3Q9BQQ7 232 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 STK33Q9BYT3 514 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 SLC28A3Q9HAS3 691 aa28.86■■■□□ 2.21
SH3GL3-205ENST00000563901 PCDHB4Q9Y5E5 795 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms