RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 TMEM174Q8WUU8 243 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 ZNF707Q96C28 371 aaPredicted RBP14.45□□□□□ -0.1
CLK3-213ENST00000563842 TIGD1Q96MW7 591 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 GTPBP4Q9BZE4 634 aaKnown RBP14.45□□□□□ -0.1
CLK3-213ENST00000563842 INTS13Q9NVM9 706 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 RMND1Q9NWS8 449 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 AFF4Q9UHB7 1163 aaKnown RBP14.45□□□□□ -0.1
CLK3-213ENST00000563842 CDH22Q9UJ99 828 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 AGAP1Q9UPQ3 857 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 CLUHO75153 1309 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 WDR27A2RRH5 827 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 C2CD4DB7Z1M9 353 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 CYB561D2O14569 222 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 PRRG1O14668 218 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 LRG1P02750 347 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 ITGB3P05106 788 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 KRT19P08727 400 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 TNNI1P19237 187 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 POLR2BP30876 1174 aaKnown RBP14.44□□□□□ -0.1
CLK3-213ENST00000563842 MYO1EQ12965 1108 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 PSMD6Q15008 389 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 SLC9A9Q8IVB4 645 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 TCEAL8Q8IYN2 117 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 C1orf127Q8N9H9 656 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 EPHX3Q9H6B9 360 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 CYP4F11Q9HBI6 524 aa14.44□□□□□ -0.1
CLK3-213ENST00000563842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLK3-213ENST00000563842 TIMM13Q9Y5L4 95 aaPredicted RBP14.44□□□□□ -0.1
CLK3-213ENST00000563842 NOTCH4Q99466 2003 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 SPTLC1O15269 473 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 HUS1O60921 280 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 SMC2O95347 1197 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 SP100P23497 879 aaPredicted RBP14.43□□□□□ -0.1
CLK3-213ENST00000563842 WNT7BP56706 349 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 CYP24A1Q07973 514 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 SMARCB1Q12824 385 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 GPR17Q13304 367 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 ELMOD1Q8N336 334 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 TMEM130Q8N3G9 435 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 GUF1Q8N442 669 aaKnown RBP14.43□□□□□ -0.1
CLK3-213ENST00000563842 ENGASEQ8NFI3 743 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 KHSRPQ92945 711 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLK3-213ENST00000563842 GSDMAQ96QA5 445 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 MTMR12Q9C0I1 747 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 KCTD10Q9H3F6 313 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 MUTYHQ9UIF7 546 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 POLIQ9UNA4 740 aa14.43□□□□□ -0.1
CLK3-213ENST00000563842 ZFP37Q9Y6Q3 630 aaPredicted RBP14.43□□□□□ -0.1
CLK3-213ENST00000563842 CCL16O15467 120 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 GPR37L1O60883 481 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 DLATP10515 647 aaKnown RBP14.42□□□□□ -0.1
CLK3-213ENST00000563842 RPL13P26373 211 aaKnown RBP14.42□□□□□ -0.1
CLK3-213ENST00000563842 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
CLK3-213ENST00000563842 AP3M2P53677 418 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 ADCY1Q08828 1119 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 BFSP1Q12934 665 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 PLD1Q13393 1074 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 SNW1Q13573 536 aaKnown RBP14.42□□□□□ -0.1
CLK3-213ENST00000563842 PTPN21Q16825 1174 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 TMEM31Q5JXX7 168 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 ELOA2Q8IYF1 753 aaPredicted RBP14.42□□□□□ -0.1
CLK3-213ENST00000563842 TMEM86AQ8N2M4 240 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 SPATA18Q8TC71 538 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 BORCS6Q96GS4 357 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 MFSD14AQ96MC6 490 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 CGRRF1Q99675 332 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 DMAC2Q9NW81 257 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 GDAP2Q9NXN4 497 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 TRAF3IP3Q9Y228 551 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 FRMD4BQ9Y2L6 1034 aa14.42□□□□□ -0.1
CLK3-213ENST00000563842 KINO60870 393 aaKnown RBP14.41□□□□□ -0.1
CLK3-213ENST00000563842 NR3C1P04150 777 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 PTPN2P17706 415 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 FSHRP23945 695 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 NFIL3Q16649 462 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 IQCEQ6IPM2 695 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 RNF19BQ6ZMZ0 732 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 DPH6Q7L8W6 267 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 TRAPPC11Q7Z392 1133 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 GRASPQ7Z6J2 395 aaPredicted RBP14.41□□□□□ -0.1
CLK3-213ENST00000563842 DCP1BQ8IZD4 617 aaKnown RBP14.41□□□□□ -0.1
CLK3-213ENST00000563842 EDAQ92838 391 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 SMARCE1Q969G3 411 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 NXPE3Q969Y0 559 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 CCDC127Q96BQ5 260 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 HSFX1Q9UBD0 423 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 SORCS3Q9UPU3 1222 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 INSL5Q9Y5Q6 135 aa14.41□□□□□ -0.1
CLK3-213ENST00000563842 TECTAO75443 2155 aa14.4□□□□□ -0.1
CLK3-213ENST00000563842 ZNF197O14709 1029 aa14.4□□□□□ -0.1
CLK3-213ENST00000563842 LHX1P48742 406 aa14.4□□□□□ -0.1
CLK3-213ENST00000563842 ZXDAP98168 799 aa14.4□□□□□ -0.1
CLK3-213ENST00000563842 MYL7Q01449 175 aa14.4□□□□□ -0.1
CLK3-213ENST00000563842 TSPY1Q01534 308 aa14.4□□□□□ -0.1
CLK3-213ENST00000563842 TRPC3Q13507 836 aa14.4□□□□□ -0.1
CLK3-213ENST00000563842 PNOCQ13519 176 aa14.4□□□□□ -0.1
CLK3-213ENST00000563842 MTMR3Q13615 1198 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms