RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CENPPQ6IPU0 288 aa20.31■□□□□ 0.84
NME3-204ENST00000563498 KIF12Q96FN5 646 aa20.31■□□□□ 0.84
NME3-204ENST00000563498 CNTNAP3BQ96NU0 1288 aa20.31■□□□□ 0.84
NME3-204ENST00000563498 PGLYRP2Q96PD5 576 aa20.31■□□□□ 0.84
NME3-204ENST00000563498 CNTNAP3Q9BZ76 1288 aa20.31■□□□□ 0.84
NME3-204ENST00000563498 HAPLN2Q9GZV7 340 aa20.31■□□□□ 0.84
NME3-204ENST00000563498 LARSQ9P2J5 1176 aaKnown RBP20.31■□□□□ 0.84
NME3-204ENST00000563498 HSFX1Q9UBD0 423 aa20.31■□□□□ 0.84
NME3-204ENST00000563498 TIMM13Q9Y5L4 95 aaPredicted RBP20.31■□□□□ 0.84
NME3-204ENST00000563498 MYBPHLA2RUH7 354 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 FGF19O95750 216 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 OR4Q2P0C623 313 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 SCP2P22307 547 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 MATR3P43243 847 aaKnown RBP eCLIP20.3■□□□□ 0.84
NME3-204ENST00000563498 KPNA1P52294 538 aaPredicted RBP20.3■□□□□ 0.84
NME3-204ENST00000563498 NCKAP1LP55160 1127 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 SPAG1Q07617 926 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 DGKKQ5KSL6 1271 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 PRR23BQ6ZRT6 265 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 RALGPS2Q86X27 583 aaPredicted RBP20.3■□□□□ 0.84
NME3-204ENST00000563498 NETO1Q8TDF5 533 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 PNMA5Q96PV4 448 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 OBP2AQ9NY56 170 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 EPG5Q9HCE0 2579 aa20.3■□□□□ 0.84
NME3-204ENST00000563498 MYH11P35749 1972 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 DCDC2BA2VCK2 349 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 SLC38A8A6NNN8 435 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 SEC24BO95487 1268 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 ADRB2P07550 413 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 WEE1P30291 646 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 SLC12A3P55017 1021 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 ATP2C1P98194 919 aaPredicted RBP20.29■□□□□ 0.84
NME3-204ENST00000563498 SIM2Q14190 667 aaPredicted RBP20.29■□□□□ 0.84
NME3-204ENST00000563498 ZRSR1Q15695 479 aaKnown RBP20.29■□□□□ 0.84
NME3-204ENST00000563498 LPAL2Q16609 132 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 ARHGAP29Q52LW3 1261 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 RILPL1Q5EBL4 403 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 OVOS1Q6IE37 1185 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 DSTYKQ6XUX3 929 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 LONP2Q86WA8 852 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 ARID3BQ8IVW6 561 aaPredicted RBP20.29■□□□□ 0.84
NME3-204ENST00000563498 PSMG2Q969U7 264 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 BICD1Q96G01 975 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 MKNK1Q9BUB5 465 aa20.29■□□□□ 0.84
NME3-204ENST00000563498 MTMR11A4FU01 709 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 LACTBL1A8MY62 500 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 SPECC1L-ADORA2AF8WAN1 911 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 K7ESF4 209 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 SLC30A4O14863 429 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 HRO43593 1189 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 FAM189A1O60320 539 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 FOXD2O60548 495 aaPredicted RBP20.28■□□□□ 0.84
NME3-204ENST00000563498 NEFLP07196 543 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 PLA2G4BP0C869 781 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 HOXA6P31267 233 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 CTHP32929 405 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 TNFSF9P41273 254 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 ENOX2Q16206 610 aaKnown RBP20.28■□□□□ 0.84
NME3-204ENST00000563498 CSRP2Q16527 193 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 STXBP5Q5T5C0 1151 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 GAREM2Q75VX8 874 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 HAUS6Q7Z4H7 955 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 DNAJB7Q7Z6W7 309 aaPredicted RBP20.28■□□□□ 0.84
NME3-204ENST00000563498 ITIH5Q86UX2 942 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 TMEM130Q8N3G9 435 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 SYNPOQ8N3V7 929 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 SEMA4GQ9NTN9 838 aa20.28■□□□□ 0.84
NME3-204ENST00000563498 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.28■□□□□ 0.84
NME3-204ENST00000563498 NUP210Q8TEM1 1887 aaPredicted RBP20.27■□□□□ 0.84
NME3-204ENST00000563498 CHURC1-FNTBB4DL54 471 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 OGTO15294 1046 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 PIGRP01833 764 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 ODC1P11926 461 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 SOX9P48436 509 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 FNTBP49356 437 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 LIG4P49917 911 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 LILRA4P59901 499 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 SPATA1Q5VX52 437 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 ARMCX5Q6P1M9 558 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 CD302Q8IX05 232 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 ATAD1Q8NBU5 361 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 CDK5RAP3Q96JB5 506 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 LRRC3BQ96PB8 259 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 ATXN3LQ9H3M9 355 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 RPF1Q9H9Y2 349 aaKnown RBP20.27■□□□□ 0.84
NME3-204ENST00000563498 RBM12Q9NTZ6 932 aaKnown RBP20.27■□□□□ 0.84
NME3-204ENST00000563498 ODF2LQ9ULJ1 636 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 SLC27A5Q9Y2P5 690 aa20.27■□□□□ 0.84
NME3-204ENST00000563498 SPTBN2O15020 2390 aa20.27■□□□□ 0.83
NME3-204ENST00000563498 KMT2BQ9UMN6 2715 aaPredicted RBP20.26■□□□□ 0.83
NME3-204ENST00000563498 DPYSL4O14531 572 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 HNRNPDLO14979 420 aaKnown RBP20.26■□□□□ 0.83
NME3-204ENST00000563498 ADRB1P08588 477 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 GUCY2FP51841 1108 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 PLCB2Q00722 1185 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 DMWDQ09019 674 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 TMEM119Q4V9L6 283 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 ARHGAP15Q53QZ3 475 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 ARSHQ5FYA8 562 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 WDR44Q5JSH3 913 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms