RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 UPF2Q9HAU5 1272 aaKnown RBP22.75■■□□□ 1.23
CHD9-208ENST00000563410 TRPV4Q9HBA0 871 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 TISP43B9A030 160 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 KRT18P05783 430 aaKnown RBP22.74■■□□□ 1.23
CHD9-208ENST00000563410 NFICP08651 508 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 VIPR2P41587 438 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 RPS9P46781 194 aaKnown RBP22.74■■□□□ 1.23
CHD9-208ENST00000563410 ID4P47928 161 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 TEAD2Q15562 447 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 ZC2HC1CQ53FD0 456 aaPredicted RBP22.74■■□□□ 1.23
CHD9-208ENST00000563410 CENPPQ6IPU0 288 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 USP49Q70CQ1 688 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 SENP8Q96LD8 212 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 TMEM209Q96SK2 561 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 CCSER1Q9C0I3 900 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 ZNF334Q9HCZ1 680 aaPredicted RBP22.74■■□□□ 1.23
CHD9-208ENST00000563410 DENND4CQ5VZ89 1909 aa22.74■■□□□ 1.23
CHD9-208ENST00000563410 ANO9A1A5B4 782 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 MTMR11A4FU01 709 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 PIRO00625 290 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 TBCAO75347 108 aaKnown RBP22.73■■□□□ 1.23
CHD9-208ENST00000563410 PSMC3P17980 439 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 DDIT3P35638 169 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 CSTF1Q05048 431 aaKnown RBP22.73■■□□□ 1.23
CHD9-208ENST00000563410 MYBPC2Q14324 1141 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 C9orf57Q5W0N0 161 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 RASSF8Q8NHQ8 419 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 ZSCAN18Q8TBC5 510 aaPredicted RBP22.73■■□□□ 1.23
CHD9-208ENST00000563410 IRF7Q92985 503 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 EPSTI1Q96J88 318 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 ST6GALNAC4Q9H4F1 302 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 TRPV5Q9NQA5 729 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 SLC27A5Q9Y2P5 690 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 MRPS17Q9Y2R5 130 aaKnown RBP22.73■■□□□ 1.23
CHD9-208ENST00000563410 STYXL1Q9Y6J8 313 aa22.73■■□□□ 1.23
CHD9-208ENST00000563410 NCAM2O15394 837 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 GDI1P31150 447 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 ACOT2P49753 483 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 PLD1Q13393 1074 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 PTPAQ15257 358 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 MFSD6LQ8IWD5 586 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 TTC9BQ8N6N2 239 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 ATAD1Q8NBU5 361 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 DEPDC1BQ8WUY9 529 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 NELL1Q92832 810 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 IKZF4Q9H2S9 585 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 DERAQ9Y315 318 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 CLIC4Q9Y696 253 aa22.72■■□□□ 1.23
CHD9-208ENST00000563410 KIF26AQ9ULI4 1882 aaPredicted RBP22.71■■□□□ 1.23
CHD9-208ENST00000563410 A0A1W2PRU2 124 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 KINO60870 393 aaKnown RBP22.71■■□□□ 1.23
CHD9-208ENST00000563410 ODC1P11926 461 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 ABCD1P33897 745 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 EPHB3P54753 998 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 FOXK2Q01167 660 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 CUL4AQ13619 759 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 TMEM132DQ14C87 1099 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 RSPRY1Q96DX4 576 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 GPR88Q9GZN0 384 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 ASB7Q9H672 318 aa22.71■■□□□ 1.23
CHD9-208ENST00000563410 HEPACAM2A8MVW5 462 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 ARNTLO00327 626 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 MAN2B1O00754 1011 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 SOAT2O75908 522 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 CYP11A1P05108 521 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 PAX3P23760 479 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 STXBP5Q5T5C0 1151 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 ADALQ6DHV7 355 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 CRELD2Q6UXH1 353 aaPredicted RBP22.7■■□□□ 1.22
CHD9-208ENST00000563410 ZNF720Q7Z2F6 126 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 KIAA2013Q8IYS2 634 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 DCLK2Q8N568 766 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 ZBTB44Q8NCP5 570 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 OR10T2Q8NGX3 314 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 RUBCNQ92622 972 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 MKNK1Q9BUB5 465 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 PRMT8Q9NR22 394 aaPredicted RBP22.7■■□□□ 1.22
CHD9-208ENST00000563410 AGO2Q9UKV8 859 aaKnown RBP22.7■■□□□ 1.22
CHD9-208ENST00000563410 NDRG2Q9UN36 371 aaKnown RBP22.7■■□□□ 1.22
CHD9-208ENST00000563410 PCDHGA2Q9Y5H1 932 aa22.7■■□□□ 1.22
CHD9-208ENST00000563410 VPS37CA5D8V6 355 aaPredicted RBP22.69■■□□□ 1.22
CHD9-208ENST00000563410 PPP1R37O75864 691 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 ALDH1A3P47895 512 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 MTAPQ13126 283 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 SLFN12LQ6IEE8 588 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 TSSK4Q6SA08 328 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 GAREM2Q75VX8 874 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 DYMQ7RTS9 669 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 SFR1Q86XK3 245 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 PSMG2Q969U7 264 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 BORCS6Q96GS4 357 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 STRA6Q9BX79 667 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 SLITRK6Q9H5Y7 841 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 FBXO2Q9UK22 296 aaPredicted RBP22.69■■□□□ 1.22
CHD9-208ENST00000563410 C2CD2Q9Y426 696 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 ASB3Q9Y575 518 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 PIAS3Q9Y6X2 628 aa22.69■■□□□ 1.22
CHD9-208ENST00000563410 ZNF638Q14966 1978 aaKnown RBP22.69■■□□□ 1.22
CHD9-208ENST00000563410 OBSL1O75147 1896 aa22.68■■□□□ 1.22
CHD9-208ENST00000563410 ZNF263O14978 683 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms