RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 SHKBP1Q8TBC3 707 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 EPSTI1Q96J88 318 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 SENP8Q96LD8 212 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 DNAJC25Q9H1X3 360 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 ST6GALNAC4Q9H4F1 302 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 ZNF334Q9HCZ1 680 aaPredicted RBP17.08■□□□□ 0.32
CLK3-211ENST00000563297 SLC27A5Q9Y2P5 690 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 CLIC4Q9Y696 253 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 STYXL1Q9Y6J8 313 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 DCHS1Q96JQ0 3298 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 PATJQ8NI35 1801 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 GPR179Q6PRD1 2367 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 ANO9A1A5B4 782 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 TISP43B9A030 160 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 TBCAO75347 108 aaKnown RBP17.07■□□□□ 0.32
CLK3-211ENST00000563297 NFICP08651 508 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 PAX3P23760 479 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 GDI1P31150 447 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 RPS9P46781 194 aaKnown RBP17.07■□□□□ 0.32
CLK3-211ENST00000563297 EPHB3P54753 998 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 CSTF1Q05048 431 aaKnown RBP17.07■□□□□ 0.32
CLK3-211ENST00000563297 PTPAQ15257 358 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 ZNF720Q7Z2F6 126 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 TMC8Q8IU68 726 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 MFSD6LQ8IWD5 586 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 ZNF687Q8N1G0 1237 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 ATAD1Q8NBU5 361 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 ZSCAN18Q8TBC5 510 aaPredicted RBP17.07■□□□□ 0.32
CLK3-211ENST00000563297 IRF7Q92985 503 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 TMEM209Q96SK2 561 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 GPR88Q9GZN0 384 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 ASB7Q9H672 318 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 TRPV5Q9NQA5 729 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 MRPS17Q9Y2R5 130 aaKnown RBP17.07■□□□□ 0.32
CLK3-211ENST00000563297 DERAQ9Y315 318 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 FRYLO94915 3013 aa17.07■□□□□ 0.32
CLK3-211ENST00000563297 MTMR11A4FU01 709 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 MAN2B1O00754 1011 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 ALDH1A3P47895 512 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 ID4P47928 161 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 PLD1Q13393 1074 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 TMEM132DQ14C87 1099 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 ADALQ6DHV7 355 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 SLFN12LQ6IEE8 588 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 ARMCX5Q6P1M9 558 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 DYMQ7RTS9 669 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 DNAJB7Q7Z6W7 309 aaPredicted RBP17.06■□□□□ 0.32
CLK3-211ENST00000563297 TTC9BQ8N6N2 239 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 KRI1Q8N9T8 703 aaKnown RBP17.06■□□□□ 0.32
CLK3-211ENST00000563297 SUMF1Q8NBK3 374 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 DEPDC1BQ8WUY9 529 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 BORCS6Q96GS4 357 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 IKZF4Q9H2S9 585 aa17.06■□□□□ 0.32
CLK3-211ENST00000563297 AGO2Q9UKV8 859 aaKnown RBP17.06■□□□□ 0.32
CLK3-211ENST00000563297 NCANO14594 1321 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 A0A1W2PRU2 124 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 VPS37CA5D8V6 355 aaPredicted RBP17.05■□□□□ 0.32
CLK3-211ENST00000563297 HEPACAM2A8MVW5 462 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
CLK3-211ENST00000563297 CYP11A1P05108 521 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 ODC1P11926 461 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 FOXK2Q01167 660 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 CRELD2Q6UXH1 353 aaPredicted RBP17.05■□□□□ 0.32
CLK3-211ENST00000563297 STRA6Q9BX79 667 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 NDRG2Q9UN36 371 aaKnown RBP17.05■□□□□ 0.32
CLK3-211ENST00000563297 ASB3Q9Y575 518 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 SRPRBQ9Y5M8 271 aaKnown RBP17.05■□□□□ 0.32
CLK3-211ENST00000563297 TICRRQ7Z2Z1 1910 aa17.05■□□□□ 0.32
CLK3-211ENST00000563297 ZNF263O14978 683 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 SOAT2O75908 522 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 ADSSP30520 456 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 POU5F1Q01860 360 aaKnown RBP17.04■□□□□ 0.32
CLK3-211ENST00000563297 GAREM2Q75VX8 874 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 SFR1Q86XK3 245 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 GPIHBP1Q8IV16 184 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 KIAA2013Q8IYS2 634 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 DCLK2Q8N568 766 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 ZBTB44Q8NCP5 570 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 OR10T2Q8NGX3 314 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 FAM3CQ92520 227 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 RUBCNQ92622 972 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 NELL1Q92832 810 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 PSMG2Q969U7 264 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 E2F7Q96AV8 911 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 RSPRY1Q96DX4 576 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 CLIC6Q96NY7 704 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 SLITRK6Q9H5Y7 841 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 DPP3Q9NY33 737 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 HSFX1Q9UBD0 423 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 STK17AQ9UEE5 414 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 FBXO2Q9UK22 296 aaPredicted RBP17.04■□□□□ 0.32
CLK3-211ENST00000563297 C2CD2Q9Y426 696 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 PCDHGA2Q9Y5H1 932 aa17.04■□□□□ 0.32
CLK3-211ENST00000563297 DMXL1Q9Y485 3027 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 MYMKA6NI61 221 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 ARNTLO00327 626 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 CYB561D2O14569 222 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 PPP1R37O75864 691 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 PDCP20941 246 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms