RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 HOOK1Q9UJC3 728 aaKnown RBP20.15■□□□□ 0.82
CDH11-206ENST00000562998 MAPK13O15264 365 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 CALUO43852 315 aaPredicted RBP20.14■□□□□ 0.81
CDH11-206ENST00000562998 KINO60870 393 aaKnown RBP20.14■□□□□ 0.81
CDH11-206ENST00000562998 PRPF40AO75400 957 aaKnown RBP20.14■□□□□ 0.81
CDH11-206ENST00000562998 SMC2O95347 1197 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 HNRNPA1P09651 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
CDH11-206ENST00000562998 TMEM191BP0C7N4 346 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 PRCPP42785 496 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 RBP5P82980 135 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 SV2CQ496J9 727 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 OVOS1Q6IE37 1185 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 TRAPPC11Q7Z392 1133 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 LIMS2Q7Z4I7 341 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 KHSRPQ92945 711 aaKnown RBP eCLIP20.14■□□□□ 0.81
CDH11-206ENST00000562998 SMARCE1Q969G3 411 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 ANKRD36BP1Q96IX9 119 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 ZNF560Q96MR9 790 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 IPO9Q96P70 1041 aaKnown RBP20.14■□□□□ 0.81
CDH11-206ENST00000562998 RTP3Q9BQQ7 232 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 MAFFQ9ULX9 164 aa20.14■□□□□ 0.81
CDH11-206ENST00000562998 ARHGEF37A1IGU5 675 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 OR6C75A6NL08 312 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 CYB561D2O14569 222 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 VNN2O95498 520 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 C8AP07357 584 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 EDRF1Q3B7T1 1238 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 CENPPQ6IPU0 288 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 TCEAL8Q8IYN2 117 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 CCDC127Q96BQ5 260 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 GTPBP4Q9BZE4 634 aaKnown RBP20.13■□□□□ 0.81
CDH11-206ENST00000562998 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 DSEQ9UL01 958 aa20.13■□□□□ 0.81
CDH11-206ENST00000562998 SEC24AO95486 1093 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 CST3P01034 146 aaPredicted RBP20.12■□□□□ 0.81
CDH11-206ENST00000562998 TNNC2P02585 160 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 DLATP10515 647 aaKnown RBP20.12■□□□□ 0.81
CDH11-206ENST00000562998 BMP6P22004 513 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 LIN9Q5TKA1 542 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 WSCD1Q658N2 575 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 USP37Q86T82 979 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 OR10T2Q8NGX3 314 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 SLC7A14Q8TBB6 771 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 TMC2Q8TDI7 906 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 SMG7Q92540 1137 aaKnown RBP20.12■□□□□ 0.81
CDH11-206ENST00000562998 FNBP1Q96RU3 617 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 WDR6Q9NNW5 1121 aaKnown RBP20.12■□□□□ 0.81
CDH11-206ENST00000562998 AFF4Q9UHB7 1163 aaKnown RBP20.12■□□□□ 0.81
CDH11-206ENST00000562998 MAN1B1Q9UKM7 699 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 USTQ9Y2C2 406 aa20.12■□□□□ 0.81
CDH11-206ENST00000562998 LRRIQ3A6PVS8 624 aaPredicted RBP20.11■□□□□ 0.81
CDH11-206ENST00000562998 AKAP3O75969 853 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 TNNI1P19237 187 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 NR2F2P24468 414 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 ENPEPQ07075 957 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 GPR17Q13304 367 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 PPM1LQ5SGD2 360 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 C1orf220Q5T0J3 134 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 RNF19BQ6ZMZ0 732 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 CCDC149Q6ZUS6 474 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 ZC3H3Q8IXZ2 948 aaKnown RBP20.11■□□□□ 0.81
CDH11-206ENST00000562998 ADSSL1Q8N142 457 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 RPGRIP1Q96KN7 1286 aa20.11■□□□□ 0.81
CDH11-206ENST00000562998 DOCK6Q96HP0 2047 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 SPDYE4A6NLX3 237 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 STAU1O95793 577 aaKnown RBP20.1■□□□□ 0.81
CDH11-206ENST00000562998 C4BPAP04003 597 aaKnown RBP20.1■□□□□ 0.81
CDH11-206ENST00000562998 KRT19P08727 400 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 OR4Q2P0C623 313 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 SSTR3P32745 418 aaPredicted RBP20.1■□□□□ 0.81
CDH11-206ENST00000562998 ARPP19P56211 112 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 DLG4P78352 724 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 PDCL2Q8N4E4 241 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 SPATA18Q8TC71 538 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 TMEM209Q96SK2 561 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 ZCWPW1Q9H0M4 648 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 L1RE1Q9UN81 338 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 NOTCH4Q99466 2003 aa20.1■□□□□ 0.81
CDH11-206ENST00000562998 CLUHO75153 1309 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 C2CD4DB7Z1M9 353 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 GABRDO14764 452 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 IKBKBO14920 756 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 N4BP1O75113 896 aaKnown RBP20.09■□□□□ 0.81
CDH11-206ENST00000562998 RPL13P26373 211 aaKnown RBP20.09■□□□□ 0.81
CDH11-206ENST00000562998 AP3M2P53677 418 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 PMS1P54277 932 aaKnown RBP20.09■□□□□ 0.81
CDH11-206ENST00000562998 ADCY1Q08828 1119 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 BFSP1Q12934 665 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 ADAM9Q13443 819 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 MORC3Q14149 939 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 SOWAHAQ2M3V2 549 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 TDRD10Q5VZ19 366 aaKnown RBP20.09■□□□□ 0.81
CDH11-206ENST00000562998 DPH6Q7L8W6 267 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 RNF135Q8IUD6 432 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 TOP6BLQ8N6T0 577 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 HPDLQ96IR7 371 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 XYLT2Q9H1B5 865 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 CRISPLD1Q9H336 500 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 FRMD4BQ9Y2L6 1034 aa20.09■□□□□ 0.81
CDH11-206ENST00000562998 NR2E1Q9Y466 385 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms