RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 TTI2Q6NXR4 508 aa18■□□□□ 0.47
CLK3-207ENST00000562389 SYCE2Q6PIF2 218 aa18■□□□□ 0.47
CLK3-207ENST00000562389 ELMSAN1Q6PJG2 1045 aa18■□□□□ 0.47
CLK3-207ENST00000562389 PALB2Q86YC2 1186 aa18■□□□□ 0.47
CLK3-207ENST00000562389 MAN1C1Q9NR34 630 aa18■□□□□ 0.47
CLK3-207ENST00000562389 GDAP2Q9NXN4 497 aa18■□□□□ 0.47
CLK3-207ENST00000562389 FBXL5Q9UKA1 691 aa18■□□□□ 0.47
CLK3-207ENST00000562389 FBXW11Q9UKB1 542 aa18■□□□□ 0.47
CLK3-207ENST00000562389 TIMM13Q9Y5L4 95 aaPredicted RBP18■□□□□ 0.47
CLK3-207ENST00000562389 MBTPS2O43462 519 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 C4BPAP04003 597 aaKnown RBP17.99■□□□□ 0.47
CLK3-207ENST00000562389 KCNQ1P51787 676 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 CLUL1Q15846 466 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 TJAP1Q5JTD0 557 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 C1orf220Q5T0J3 134 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 TDRD10Q5VZ19 366 aaKnown RBP17.99■□□□□ 0.47
CLK3-207ENST00000562389 RBM43Q6ZSC3 357 aaKnown RBP17.99■□□□□ 0.47
CLK3-207ENST00000562389 EEF2KMTQ96G04 330 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 HPDLQ96IR7 371 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 CEP63Q96MT8 703 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 DUSP9Q99956 384 aaKnown RBP17.99■□□□□ 0.47
CLK3-207ENST00000562389 S1PR5Q9H228 398 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 PLEKHA4Q9H4M7 779 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 SFXN1Q9H9B4 322 aa17.99■□□□□ 0.47
CLK3-207ENST00000562389 GRXCR2A6NFK2 248 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 OR6C75A6NL08 312 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 STAU1O95793 577 aaKnown RBP17.98■□□□□ 0.47
CLK3-207ENST00000562389 CST3P01034 146 aaPredicted RBP17.98■□□□□ 0.47
CLK3-207ENST00000562389 ROR1Q01973 937 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 ITIH3Q06033 890 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 BIRC3Q13489 604 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 TRPC3Q13507 836 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 ZACNQ401N2 412 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 PTCRAQ6ISU1 281 aaPredicted RBP17.98■□□□□ 0.47
CLK3-207ENST00000562389 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 METTL23Q86XA0 190 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 TOP6BLQ8N6T0 577 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 MLKLQ8NB16 471 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 KREMEN2Q8NCW0 462 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 SPATA18Q8TC71 538 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 FAM50BQ9Y247 325 aa17.98■□□□□ 0.47
CLK3-207ENST00000562389 WDR27A2RRH5 827 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 HUS1O60921 280 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 PHACTR2O75167 634 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 ABLIM3O94929 683 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 PAPLNO95428 1278 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 TRIM49P0CI25 452 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 TRIM49CP0CI26 452 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 BMP1P13497 986 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 ATICP31939 592 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 WSCD1Q658N2 575 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 SV2AQ7L0J3 742 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 FILIP1Q7Z7B0 1213 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 TMEM86AQ8N2M4 240 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 CMASQ8NFW8 434 aaPredicted RBP17.97■□□□□ 0.47
CLK3-207ENST00000562389 ZNF461Q8TAF7 563 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 ADAM7Q9H2U9 754 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 VRTNQ9H8Y1 702 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 RWDD2AQ9UIY3 292 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 L1RE1Q9UN81 338 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 SNX9Q9Y5X1 595 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 C2orf16Q68DN1 1984 aa17.97■□□□□ 0.47
CLK3-207ENST00000562389 TCF20Q9UGU0 1960 aaKnown RBP17.97■□□□□ 0.47
CLK3-207ENST00000562389 SPDYE4A6NLX3 237 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 VNN1O95497 513 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 SPATA31D3P0C874 917 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 GTF2H1P32780 548 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 STX17P56962 302 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 NLRP12P59046 1061 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 MYL6P60660 151 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 PPP3CAQ08209 521 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 SMAD2Q15796 467 aaKnown RBP17.96■□□□□ 0.47
CLK3-207ENST00000562389 RARS2Q5T160 578 aaKnown RBP17.96■□□□□ 0.47
CLK3-207ENST00000562389 TPGS2Q68CL5 300 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 SPATA31D4Q6ZUB0 917 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 RTL10Q7L3V2 364 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 DPH6Q7L8W6 267 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 LIMS2Q7Z4I7 341 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 PDCL2Q8N4E4 241 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 SUSD6Q92537 303 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 SYAP1Q96A49 352 aaPredicted RBP17.96■□□□□ 0.47
CLK3-207ENST00000562389 XYLT2Q9H1B5 865 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 METTL14Q9HCE5 456 aaKnown RBP17.96■□□□□ 0.47
CLK3-207ENST00000562389 ZDHHC7Q9NXF8 308 aa17.96■□□□□ 0.47
CLK3-207ENST00000562389 USP15Q9Y4E8 981 aaPredicted RBP17.96■□□□□ 0.47
CLK3-207ENST00000562389 XIRP2A4UGR9 3374 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 DENND4AQ7Z401 1863 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 STX10O60499 249 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 ZMYND10O75800 440 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 CPB1P15086 417 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 IL9P15248 144 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 ATF2P15336 505 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 GCLMP48507 274 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 ARPP19P56211 112 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 NCOA4Q13772 614 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 SOWAHAQ2M3V2 549 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 UVSSAQ2YD98 709 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 DPCR1Q3MIW9 517 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 CCDC183Q5T5S1 534 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 LIN9Q5TKA1 542 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms