RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 TRIM58Q8NG06 486 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 CTNNBL1Q8WYA6 563 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-205ENST00000562310 TRIM11Q96F44 468 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 NOX5Q96PH1 765 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 GAD1Q99259 594 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 ISCUQ9H1K1 167 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 CXCL16Q9H2A7 254 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 HIPK3Q9H422 1215 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 GDAP2Q9NXN4 497 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 TRIM10Q9UDY6 481 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 DNAI1Q9UI46 699 aa15.25■□□□□ 0.03
COMMD4-205ENST00000562310 ANKRD62A6NC57 917 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 THAP12O43422 761 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 MED7O43513 233 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 CILPO75339 1184 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 LSM8O95777 96 aaKnown RBP15.24■□□□□ 0.03
COMMD4-205ENST00000562310 RPL9P32969 192 aaKnown RBP15.24■□□□□ 0.03
COMMD4-205ENST00000562310 ATN1P54259 1190 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-205ENST00000562310 FAM189BP81408 668 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 TLE2Q04725 743 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 CLEC16AQ2KHT3 1053 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 TRIM60Q495X7 471 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 RSPH1Q8WYR4 309 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 ZNF592Q92610 1267 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 LPPQ93052 612 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 ZFP42Q96MM3 310 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 UROC1Q96N76 676 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 TMEM106CQ9BVX2 250 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 PDCL3Q9H2J4 239 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 C11orf49Q9H6J7 331 aa15.24■□□□□ 0.03
COMMD4-205ENST00000562310 BARX2Q9UMQ3 279 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-205ENST00000562310 MACROD2A1Z1Q3 448 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 CTAGE9A4FU28 777 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 NBNO60934 754 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 FAM163BP0C2L3 166 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 RFC2P35250 354 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 RAP1GAPP47736 663 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 GALCP54803 685 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 SOX4Q06945 474 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-205ENST00000562310 FAAP100Q0VG06 881 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 GLB1LQ6UWU2 654 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 SLC35F6Q8N357 371 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 RNF169Q8NCN4 708 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 GSTCDQ8NEC7 633 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 LINC01599Q8WXQ3 324 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 RFFLQ8WZ73 363 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 DDX27Q96GQ7 796 aaKnown RBP15.23■□□□□ 0.03
COMMD4-205ENST00000562310 WDR24Q96S15 920 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 MMS19Q96T76 1030 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 PCDHB18PQ96TA0 734 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 PACSIN1Q9BY11 444 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 SDCBP2Q9H190 292 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 ELAC1Q9H777 363 aaKnown RBP15.23■□□□□ 0.03
COMMD4-205ENST00000562310 TMEM161AQ9NX61 479 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 PUF60Q9UHX1 559 aaKnown RBP15.23■□□□□ 0.03
COMMD4-205ENST00000562310 KIAA1257Q9ULG3 409 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 PCDHGC3Q9UN70 934 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 CEP83Q9Y592 693 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 SNX9Q9Y5X1 595 aa15.23■□□□□ 0.03
COMMD4-205ENST00000562310 SCN5AQ14524 2016 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 MEIS3P2A8K0S8 358 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 KPNA7A9QM74 516 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 PPEF2O14830 753 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 CXCL10P02778 98 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 CYP1A1P04798 512 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-205ENST00000562310 MYBL1P10243 752 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 SCNN1GP51170 649 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 RAD23BP54727 409 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 CENPCQ03188 943 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 TCEAL1Q15170 157 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 STILQ15468 1287 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 ACAD10Q6JQN1 1059 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 DPH6Q7L8W6 267 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 UNC93AQ86WB7 457 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 PALB2Q86YC2 1186 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 RHOT2Q8IXI1 618 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 TOP6BLQ8N6T0 577 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 URGCPQ8TCY9 931 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 DIS3LQ8TF46 1054 aaKnown RBP15.22■□□□□ 0.03
COMMD4-205ENST00000562310 ZNF606Q8WXB4 792 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 TMEM176AQ96HP8 235 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 NAPGQ99747 312 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-205ENST00000562310 NT5C1AQ9BXI3 368 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 ACP6Q9NPH0 428 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 TBX21Q9UL17 535 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 TFR2Q9UP52 801 aa15.22■□□□□ 0.03
COMMD4-205ENST00000562310 MICAL3Q7RTP6 2002 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 TMCO5BA8MYB1 307 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 PODXLO00592 558 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 HOXA2O43364 376 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 HUS1O60921 280 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 ABL1P00519 1130 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 FTLP02792 175 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-205ENST00000562310 CLTBP09497 229 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 VDRP11473 427 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 UNGP13051 313 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-205ENST00000562310 CD19P15391 556 aa15.21■□□□□ 0.03
COMMD4-205ENST00000562310 NSFP46459 744 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms