RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 OVOS1Q6IE37 1185 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 USP37Q86T82 979 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TTC9BQ8N6N2 239 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 DEPDC1BQ8WUY9 529 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TMEM209Q96SK2 561 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MSTO1Q9BUK6 570 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TRPV5Q9NQA5 729 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 NDRG2Q9UN36 371 aaKnown RBP18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SLC27A5Q9Y2P5 690 aa18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 EP300Q09472 2414 aaPredicted RBP18.13■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ANK1P16157 1881 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MTMR11A4FU01 709 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TISP43B9A030 160 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 LILRB5O75023 590 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TYMPP19971 482 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 NMT1P30419 496 aaKnown RBP18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 GTF2BQ00403 316 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PLD1Q13393 1074 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MYBPC2Q14324 1141 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 STXBP5Q5T5C0 1151 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 LARP1BQ659C4 914 aaKnown RBP18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CENPPQ6IPU0 288 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ATAD1Q8NBU5 361 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 FAM212AQ96EL1 285 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TSPAN18Q96SJ8 248 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ZSCAN32Q9NX65 697 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PIAS3Q9Y6X2 628 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 OTOGLQ3ZCN5 2332 aa18.12■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CACNA1AO00555 2505 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 HEPACAM2A8MVW5 462 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ANKRD63C9JTQ0 380 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PIRO00625 290 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MAN2B1O00754 1011 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SOAT2O75908 522 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 KRT18P05783 430 aaKnown RBP18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 LONP1P36776 959 aaKnown RBP18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ZC2HC1CQ53FD0 456 aaPredicted RBP18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 C9orf57Q5W0N0 161 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MFSD6LQ8IWD5 586 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CD302Q8IX05 232 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 OR10T2Q8NGX3 314 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ATRIPQ8WXE1 791 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 FAM3CQ92520 227 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 BORCS6Q96GS4 357 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SENP8Q96LD8 212 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MKNK1Q9BUB5 465 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 GPR88Q9GZN0 384 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CHRDQ9H2X0 955 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ZHX3Q9H4I2 956 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 SLITRK6Q9H5Y7 841 aa18.11■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ANO9A1A5B4 782 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ZNF263O14978 683 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TBCAO75347 108 aaKnown RBP18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ODC1P11926 461 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TDGF1P13385 188 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ALDH1A3P47895 512 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 MCM2P49736 904 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ACOT2P49753 483 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 EPHB3P54753 998 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 TMEM132DQ14C87 1099 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 BRAPQ7Z569 592 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 RASSF8Q8NHQ8 419 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 LARP4BQ92615 738 aaKnown RBP18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 EPC1Q9H2F5 836 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 IKZF4Q9H2S9 585 aa18.1■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 BMP15O95972 392 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CYP11A1P05108 521 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CDR1P51861 262 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 FCHO2Q0JRZ9 810 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 USP49Q70CQ1 688 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 GAREM2Q75VX8 874 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 DNAJB7Q7Z6W7 309 aaPredicted RBP18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 GPIHBP1Q8IV16 184 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 PSMG2Q969U7 264 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 E2F7Q96AV8 911 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 LRRC3BQ96PB8 259 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 LMAN1LQ9HAT1 526 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 DERAQ9Y315 318 aa18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.09■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 NUP210Q8TEM1 1887 aaPredicted RBP18.08■□□□□ 0.49
VPS9D1-AS1-201ENST00000562298 CHRNB1P11230 501 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CCNE1P24864 410 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DDIT3P35638 169 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ADALQ6DHV7 355 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ARMCX5Q6P1M9 558 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 MAMSTRQ6ZN01 415 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 EPSTI1Q96J88 318 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CCSER1Q9C0I3 900 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ST6GALNAC4Q9H4F1 302 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ASB7Q9H672 318 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 NCDNQ9UBB6 729 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 HSFX1Q9UBD0 423 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SMG5Q9UPR3 1016 aaKnown RBP18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 C2CD2Q9Y426 696 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ASB3Q9Y575 518 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 STYXL1Q9Y6J8 313 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SCN1AP35498 2009 aa18.08■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ATF6P18850 670 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms