RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 CC2D2BQ6DHV5 1058 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 RGS9BPQ6ZS82 235 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 TDRPQ86YL5 185 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 GPD1LQ8N335 351 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 HAUS1Q96CS2 278 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 LRRC42Q9Y546 428 aa14.77□□□□□ -0.05
VPS9D1-202ENST00000561976 E7ENQ6 273 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 ENTPD5O75356 428 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 UPP2O95045 317 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 CFHP08603 1231 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 DSG3P32926 999 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 SOX10P56693 466 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 SATB1Q01826 763 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 PLCB3Q01970 1234 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 PDIA2Q13087 525 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 MAMLD1Q13495 774 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 NLRP9Q7RTR0 991 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 OTOAQ7RTW8 1153 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 FAM160B2Q86V87 743 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 ZNF75CPQ92670 426 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 HERC5Q9UII4 1024 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 USP21Q9UK80 565 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 ENO4A6NNW6 628 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 GOLGA8SH3BPF8 625 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 GOLGA8MH3BSY2 632 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 NFIBO00712 420 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 LYPLA2O95372 231 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 IFNB1P01574 187 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 CYP1A1P04798 512 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 KRT4P19013 534 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 TNNI1P19237 187 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 CALRP27797 417 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 PSMC5P62195 406 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 NOP14P78316 857 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 BRDTQ58F21 947 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 SPOPLQ6IQ16 392 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 SLC39A4Q6P5W5 647 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 CENPUQ71F23 418 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 MTDHQ86UE4 582 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 ANKMY2Q8IV38 441 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 C4orf19Q8IY42 314 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 DCTN4Q9UJW0 460 aa14.76□□□□□ -0.05
VPS9D1-202ENST00000561976 KRT1P04264 644 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 SLC18A1P54219 525 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 TSNAXIP1Q2TAA8 658 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 EAPPQ56P03 285 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 WASHC2DQ5SRD0 308 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 OGFOD1Q8N543 542 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 FNBP1Q96RU3 617 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 MAK16Q9BXY0 300 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 DENND2DQ9H6A0 471 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 HOMER2Q9NSB8 354 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 TBC1D22BQ9NU19 505 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 PSMC3IPQ9P2W1 217 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 PCDHB4Q9Y5E5 795 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 ZC3H11AO75152 810 aaKnown RBP eCLIP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 TJP3O95049 919 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 TROVE2P10155 538 aaKnown RBP eCLIP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 MYCLP12524 364 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 EIF2AK2P19525 551 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 PTPN4P29074 926 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 PIK3CAP42336 1068 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 PTDSS1P48651 473 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 HSD17B4P51659 736 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 SESN3P58005 492 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 CPXCR1Q8N123 301 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 FBXO41Q8TF61 875 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 FBXL18Q96ME1 805 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 SPATS2LQ9NUQ6 558 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 TMOD2Q9NZR1 351 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 SCINQ9Y6U3 715 aa14.75□□□□□ -0.05
VPS9D1-202ENST00000561976 A6NHS1 94 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 BANF1O75531 89 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 LINGO3P0C6S8 592 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 MARK3P27448 753 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 MRPS9P82933 396 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 CCDC6Q16204 474 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 MUM1Q2TAK8 710 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 ANO7Q6IWH7 933 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 TMEM270Q6UE05 265 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 MFSD7Q6UXD7 560 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 RCOR2Q8IZ40 523 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 LARGE2Q8N3Y3 721 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 SUPT20HQ8NEM7 779 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 BSNDQ8WZ55 320 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 ZNF516Q92618 1163 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 RBM41Q96IZ5 413 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 FEM1BQ9UK73 627 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 UBIAD1Q9Y5Z9 338 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 CLRN2A0PK11 232 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 SGK1O00141 431 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 TYROBPO43914 113 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 HLA-DRAP01903 254 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 ATP6V1C1P21283 382 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 GNA15P30679 374 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 FKBP1AP62942 108 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 OVGP1Q12889 678 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 MORF4L2Q15014 288 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 SLC45A4Q5BKX6 768 aa14.74□□□□□ -0.05
VPS9D1-202ENST00000561976 NIPA1Q7RTP0 329 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms