RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 SH2D3CQ8N5H7 860 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 AOPEPQ8N6M6 819 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 SLC17A8Q8NDX2 589 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 NSUN7Q8NE18 718 aaKnown RBP4.87□□□□□ -1.63
CASC4-211ENST00000561305 MYCBPAPQ8TBZ2 947 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 POC1BQ8TC44 478 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 NSUN6Q8TEA1 469 aaKnown RBP4.87□□□□□ -1.63
CASC4-211ENST00000561305 SNX19Q92543 992 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 KAT5Q92993 513 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 SARAFQ96BY9 339 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 VKORC1Q9BQB6 163 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 KMT5AQ9NQR1 393 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 SIDT1Q9NXL6 827 aaKnown RBP4.87□□□□□ -1.63
CASC4-211ENST00000561305 SERPINB13Q9UIV8 391 aa4.87□□□□□ -1.63
CASC4-211ENST00000561305 COL3A1P02461 1466 aaPredicted RBP4.87□□□□□ -1.63
CASC4-211ENST00000561305 CGB1A6NKQ9 187 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 NT5C1B-RDH14C9J2C7 533 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 TOR1BO14657 336 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 RPLP2P05387 115 aaKnown RBP4.86□□□□□ -1.63
CASC4-211ENST00000561305 PPP3CBP16298 524 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 MALP21145 153 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 GUCY2FP51841 1108 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 HNRNPMP52272 730 aaKnown RBP eCLIP4.86□□□□□ -1.63
CASC4-211ENST00000561305 NXPH1P58417 271 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 SNAPC2Q13487 334 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 ABCB5Q2M3G0 1257 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 TAPT1Q6NXT6 567 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 TTC7BQ86TV6 843 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 PDSS2Q86YH6 399 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 TOR1AIP2Q8NFQ8 470 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 SCAMP4Q969E2 229 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 MAN1C1Q9NR34 630 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 MRFAP1Q9Y605 127 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 SPATA31A3Q5VYP0 1347 aa4.86□□□□□ -1.63
CASC4-211ENST00000561305 WIPF3A6NGB9 483 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 F2RL2O00254 374 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 CDK11BP21127 795 aaKnown RBP4.85□□□□□ -1.63
CASC4-211ENST00000561305 LPOP22079 712 aaPredicted RBP4.85□□□□□ -1.63
CASC4-211ENST00000561305 ITPKBP27987 946 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 FXR1P51114 621 aaKnown RBP eCLIP4.85□□□□□ -1.63
CASC4-211ENST00000561305 ADKP55263 362 aaKnown RBP4.85□□□□□ -1.63
CASC4-211ENST00000561305 KRTAP10-11P60412 298 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 ITIH3Q06033 890 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 ITKQ08881 620 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 PREPLQ4J6C6 727 aaPredicted RBP4.85□□□□□ -1.63
CASC4-211ENST00000561305 CCDC93Q567U6 631 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 TRIB1Q96RU8 372 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 SMOQ99835 787 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 SLC13A1Q9BZW2 595 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 CCDC8Q9H0W5 538 aaPredicted RBP4.85□□□□□ -1.63
CASC4-211ENST00000561305 CPNE5Q9HCH3 593 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 RLIMQ9NVW2 624 aa4.85□□□□□ -1.63
CASC4-211ENST00000561305 ADGRA2Q96PE1 1338 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 VWC2LB2RUY7 222 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 CHRM2P08172 466 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 GPD1P21695 349 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 CYP2C19P33261 490 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 NPTX2P47972 431 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 CDKN1CP49918 316 aaPredicted RBP4.84□□□□□ -1.63
CASC4-211ENST00000561305 ODF1Q14990 250 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 KHDC1Q4VXA5 237 aaKnown RBP4.84□□□□□ -1.63
CASC4-211ENST00000561305 PTF1AQ7RTS3 328 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 FAM9AQ8IZU1 332 aaPredicted RBP4.84□□□□□ -1.63
CASC4-211ENST00000561305 VRK1Q99986 396 aaPredicted RBP4.84□□□□□ -1.63
CASC4-211ENST00000561305 KLC4Q9NSK0 619 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 ETAA1Q9NY74 926 aa4.84□□□□□ -1.63
CASC4-211ENST00000561305 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.84□□□□□ -1.63
CASC4-211ENST00000561305 SBNO2Q9Y2G9 1366 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 PRSS29PA6NIE9 313 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 LINC00473A8K010 186 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 KATNA1O75449 491 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 ATXN1P54253 815 aaKnown RBP4.83□□□□□ -1.64
CASC4-211ENST00000561305 AMPD3Q01432 767 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 TSTD2Q5T7W7 516 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 RNF187Q5TA31 235 aaPredicted RBP4.83□□□□□ -1.64
CASC4-211ENST00000561305 EFCAB2Q5VUJ9 269 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 PAPD7Q5XG87 772 aaKnown RBP4.83□□□□□ -1.64
CASC4-211ENST00000561305 SLC4A10Q6U841 1118 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 B3GALNT2Q8NCR0 500 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 OSBPL9Q96SU4 736 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 BRD9Q9H8M2 597 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 GPR35Q9HC97 309 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 ADAM21Q9UKJ8 722 aa4.83□□□□□ -1.64
CASC4-211ENST00000561305 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.83□□□□□ -1.64
CASC4-211ENST00000561305 SETD1BQ9UPS6 1966 aaKnown RBP4.83□□□□□ -1.64
CASC4-211ENST00000561305 KAT6AQ92794 2004 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 TNKSO95271 1327 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 AOX1Q06278 1338 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 A0A0B4J269 797 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 DNAJC9-AS1A6NH13 148 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 ALG1L2C9J202 215 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 POLRMTO00411 1230 aaKnown RBP4.82□□□□□ -1.64
CASC4-211ENST00000561305 GJB1P08034 283 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 FTH1P19P0C7X4 201 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 TCF15Q12870 199 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 TUBB3Q13509 450 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 HABP2Q14520 560 aaPredicted RBP4.82□□□□□ -1.64
CASC4-211ENST00000561305 UAP1L1Q3KQV9 507 aa4.82□□□□□ -1.64
CASC4-211ENST00000561305 PNMA8AQ86V59 439 aaPredicted RBP4.82□□□□□ -1.64
CASC4-211ENST00000561305 PRPF38AQ8NAV1 312 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms