RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 MBD1Q9UIS9 605 aaPredicted RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 FBXL5Q9UKA1 691 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 NAP1L2Q9ULW6 460 aaPredicted RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 SLC6A14Q9UN76 642 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 RBM8AQ9Y5S9 174 aaKnown RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 ATXN2Q99700 1313 aaKnown RBP10.5□□□□□ -0.73
HERC1-210ENST00000560897 ADAMTS9Q9P2N4 1935 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 ZNF462Q96JM2 2506 aa10.5□□□□□ -0.73
HERC1-210ENST00000560897 A0A087WV48 116 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 HOXD12P35452 270 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 AKAP17AQ02040 695 aaKnown RBP10.49□□□□□ -0.73
HERC1-210ENST00000560897 FUT2Q10981 343 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 NAB2Q15742 525 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 UPP1Q16831 310 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 DUOXA1Q1HG43 343 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 B3GNT9Q6UX72 402 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 ZBTB8OSQ8IWT0 167 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 ZNF843Q8N446 348 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 MINDY1Q8N5J2 469 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 APPL2Q8NEU8 664 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 LRRC3BQ96PB8 259 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 LXNQ9BS40 222 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 EBF3Q9H4W6 596 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 GKN1Q9NS71 199 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 GDAQ9Y2T3 454 aa10.49□□□□□ -0.73
HERC1-210ENST00000560897 HECTD1Q9ULT8 2610 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 GOLGA4Q13439 2230 aaKnown RBP10.48□□□□□ -0.73
HERC1-210ENST00000560897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 LRRIQ4A6NIV6 560 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 SYPP08247 313 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 GABRR2P28476 465 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 GALK1P51570 392 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 CYP4F3Q08477 520 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 BYSLQ13895 437 aaKnown RBP10.48□□□□□ -0.73
HERC1-210ENST00000560897 ITIH5Q86UX2 942 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 TMC8Q8IU68 726 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 NOSTRINQ8IVI9 506 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 C4orf19Q8IY42 314 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 TMEFF1Q8IYR6 380 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
HERC1-210ENST00000560897 ASAP3Q8TDY4 903 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 TBCKQ8TEA7 893 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 KIF2CQ99661 725 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 GOLGA2P5Q9HBQ8 144 aa10.48□□□□□ -0.73
HERC1-210ENST00000560897 POLMQ9NP87 494 aaPredicted RBP10.48□□□□□ -0.73
HERC1-210ENST00000560897 BCCIPQ9P287 314 aaKnown RBP eCLIP10.48□□□□□ -0.73
HERC1-210ENST00000560897 ZNF638Q14966 1978 aaKnown RBP10.48□□□□□ -0.73
HERC1-210ENST00000560897 TNRC6BQ9UPQ9 1833 aaKnown RBP10.47□□□□□ -0.73
HERC1-210ENST00000560897 TRIP11Q15643 1979 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 CCDC196A0A1B0GTZ2 297 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 EML1O00423 815 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 PODXLO00592 558 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 ADAMTS3O15072 1205 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 SH3BP5O60239 455 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 DGAT1O75907 488 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 PRAMEF12O95522 483 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 TDP2O95551 362 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 U2AF2P26368 475 aaKnown RBP eCLIP10.47□□□□□ -0.73
HERC1-210ENST00000560897 MARCKSP29966 332 aaPredicted RBP10.47□□□□□ -0.73
HERC1-210ENST00000560897 CFHR1Q03591 330 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 KCNC4Q03721 635 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 BFSP1Q12934 665 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 SLC14A1Q13336 389 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 PPP2R5CQ13362 524 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 PRPF4BQ13523 1007 aaKnown RBP10.47□□□□□ -0.73
HERC1-210ENST00000560897 DCAF4L1Q3SXM0 396 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 SPDYCQ5MJ68 293 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 TRIM68Q6AZZ1 485 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 RNF19BQ6ZMZ0 732 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 TOGARAM2Q6ZUX3 1019 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 KRT25Q7Z3Z0 450 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 APBB1IPQ7Z5R6 666 aaPredicted RBP10.47□□□□□ -0.73
HERC1-210ENST00000560897 RASSF3Q86WH2 238 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 CPA6Q8N4T0 437 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 C3orf58Q8NDZ4 430 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 WHAMMQ8TF30 809 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 CD101Q93033 1021 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 CAMK1GQ96NX5 476 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 PPP1R10Q96QC0 940 aaKnown RBP10.47□□□□□ -0.73
HERC1-210ENST00000560897 POLR3FQ9H1D9 316 aaPredicted RBP10.47□□□□□ -0.73
HERC1-210ENST00000560897 PDZD7Q9H5P4 517 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 TASP1Q9H6P5 420 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 ZSWIM4Q9H7M6 989 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 HPS4Q9NQG7 708 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 FSCN3Q9NQT6 498 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 TMEM74BQ9NUR3 256 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 SLC38A7Q9NVC3 462 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 DDX25Q9UHL0 483 aaKnown RBP10.47□□□□□ -0.73
HERC1-210ENST00000560897 ASB3Q9Y575 518 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 KALRNO60229 2985 aa10.47□□□□□ -0.73
HERC1-210ENST00000560897 PTPRBP23467 1997 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 TENM4Q6N022 2769 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 SERPINF2P08697 491 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 CD59P13987 128 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 LIG1P18858 919 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 GLRA2P23416 452 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 IGFBP6P24592 240 aaPredicted RBP10.46□□□□□ -0.73
HERC1-210ENST00000560897 WEE1P30291 646 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms