RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 USO1O60763 962 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 DKC1O60832 514 aaKnown RBP eCLIP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 B3GALNT1O75752 331 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 TUSC2O75896 110 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 MT-ND3P03897 115 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ZNF18P17022 549 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 HTR1BP28222 390 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 DPP6P42658 865 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 TMEM62Q0P6H9 643 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 BYSLQ13895 437 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 NR1I3Q14994 352 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 DLGAP5Q15398 846 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ZNF423Q2M1K9 1284 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PGS1Q32NB8 556 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 Q4G0T1 1027 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PLA2G2CQ5R387 149 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ANKRD20A2Q5SQ80 823 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ANKRD20A1Q5TYW2 823 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ANKRD20A3Q5VUR7 823 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PAPD7Q5XG87 772 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 IQCEQ6IPM2 695 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 FSTL4Q6MZW2 842 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 LRFN4Q6PJG9 635 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 SYTL1Q8IYJ3 562 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PHACTR4Q8IZ21 702 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 MAP4K1Q92918 833 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 TCEANC2Q96MN5 208 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 NLRP3Q96P20 1036 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ZIM3Q96PE6 472 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 LLPHQ9BRT6 129 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 TMEM120AQ9BXJ8 343 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 CNTD2Q9H8S5 307 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 IL1RAPL2Q9NP60 686 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 DCAF16Q9NXF7 216 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 KIF17Q9P2E2 1029 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 MYH15Q9Y2K3 1946 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PARP4Q9UKK3 1724 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 DCDC2CA8MYV0 355 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 BOLA2-SMG1P6H3BVE0 249 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 SLC7A4O43246 635 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 TRAPPC3O43617 180 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 CLTAP09496 248 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 UBTFL1P0CB47 393 aaPredicted RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 RARAP10276 462 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 TSHRP16473 764 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 CAP2P40123 477 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PSMC4P43686 418 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 MAN2A2P49641 1150 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 CCDC15Q0P6D6 951 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ITGB3BPQ13352 177 aaPredicted RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 TMED1Q13445 227 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PARP10Q53GL7 1025 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 IZUMO3Q5VZ72 239 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 CD302Q8IX05 232 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 CNBD1Q8NA66 436 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 LINC00301Q8NCQ3 95 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 NAF1Q96HR8 494 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 MRPL9Q9BYD2 267 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ZMAT3Q9HA38 289 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 GPAMQ9HCL2 828 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 KCNMB3Q9NPA1 279 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PPANQ9NQ55 473 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 PANK4Q9NVE7 773 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.18□□□□□ -1.261e-9■□□□□ 11
TSPAN3-209ENST00000560715 ATXN10Q9UBB4 475 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 MTRRQ9UBK8 725 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 XPO7Q9UIA9 1087 aaKnown RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 SLC12A4Q9UP95 1085 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 GPR55Q9Y2T6 319 aaPredicted RBP7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 ZNF711Q9Y462 761 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 GMEB1Q9Y692 573 aa7.18□□□□□ -1.26
TSPAN3-209ENST00000560715 MRC1P22897 1456 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 MASP2O00187 686 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 ATP2C2O75185 946 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 KRT14P02533 472 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 HNRNPCP07910 306 aaKnown RBP eCLIP7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 DESP17661 470 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 CD86P42081 329 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 CDC16Q13042 620 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 TOR2AQ5JU69 321 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 BEND3Q5T5X7 828 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 BRINP3Q76B58 766 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 ARFGAP2Q8N6H7 521 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 PLBD2Q8NHP8 589 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 RAB24Q969Q5 203 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 CCDC51Q96ER9 411 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 C8orf76Q96K31 380 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 KLHL25Q9H0H3 589 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 QRSL1Q9H0R6 528 aaKnown RBP7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 ABCF3Q9NUQ8 709 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 GALNT8Q9NY28 637 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 AATFQ9NY61 560 aaKnown RBP eCLIP7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 DAGLAQ9Y4D2 1042 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 MEGF6O75095 1541 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 C5P01031 1676 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 FAM234BA2RU67 622 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 ZNF233A6NK53 670 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 MFAP3LO75121 409 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 E2F6O75461 281 aa7.17□□□□□ -1.26
TSPAN3-209ENST00000560715 ZNF189O75820 626 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms