RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 GUCY2FP51841 1108 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 ZNF132P52740 706 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 CYP27A1Q02318 531 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 SOX4Q06945 474 aaPredicted RBP9.2□□□□□ -0.94
TRAF3-209ENST00000560463 TUSC3Q13454 348 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 LRRC26Q2I0M4 334 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 CCDC122Q5T0U0 273 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 SCARA3Q6AZY7 606 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 CNKSR3Q6P9H4 555 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 GLB1LQ6UWU2 654 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 TRIM72Q6ZMU5 477 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 NYAP1Q6ZVC0 841 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 NOP9Q86U38 636 aaKnown RBP9.2□□□□□ -0.94
TRAF3-209ENST00000560463 SLC47A2Q86VL8 602 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 C17orf53Q8N3J3 647 aaPredicted RBP9.2□□□□□ -0.94
TRAF3-209ENST00000560463 RBBP8NLQ8NC74 664 aaPredicted RBP9.2□□□□□ -0.94
TRAF3-209ENST00000560463 URGCPQ8TCY9 931 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 LINC01599Q8WXQ3 324 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 ELMO3Q96BJ8 720 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 WNT8AQ9H1J5 351 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 NOCTQ9UK39 431 aaKnown RBP9.2□□□□□ -0.94
TRAF3-209ENST00000560463 KIAA1257Q9ULG3 409 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 BARX2Q9UMQ3 279 aaPredicted RBP9.2□□□□□ -0.94
TRAF3-209ENST00000560463 NENFQ9UMX5 172 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 REXO2Q9Y3B8 237 aaKnown RBP9.2□□□□□ -0.94
TRAF3-209ENST00000560463 PCDHB7Q9Y5E2 793 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 ARHGEF37A1IGU5 675 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 BTNL10A8MVZ5 291 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 DDX3XO00571 662 aaKnown RBP eCLIP9.19□□□□□ -0.949e-11■■■■■ 42.5
TRAF3-209ENST00000560463 MED7O43513 233 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 EFCAB14O75071 495 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 RTN2O75298 545 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 CILPO75339 1184 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 TACC1O75410 805 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 PFKMP08237 780 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 WEE2P0C1S8 567 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 CHRNB2P17787 502 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 CD58P19256 250 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 CYP2C18P33260 490 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 SCNN1GP51170 649 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 CCL23P55773 120 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 LILRA4P59901 499 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 FMO1Q01740 532 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 IKBKEQ14164 716 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 STILQ15468 1287 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 SCARA5Q6ZMJ2 495 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 LIMS2Q7Z4I7 341 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 UNC93AQ86WB7 457 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 GLYCTKQ8IVS8 523 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 RPUSD2Q8IZ73 545 aaKnown RBP9.19□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM86AQ8N2M4 240 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 RNF10Q8N5U6 811 aaKnown RBP9.19□□□□□ -0.94
TRAF3-209ENST00000560463 TOP6BLQ8N6T0 577 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 RNF169Q8NCN4 708 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 OLIG1Q8TAK6 271 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 LNX1Q8TBB1 728 aaPredicted RBP9.19□□□□□ -0.94
TRAF3-209ENST00000560463 SPATA18Q8TC71 538 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 DDX1Q92499 740 aaKnown RBP9.19□□□□□ -0.94
TRAF3-209ENST00000560463 SCLYQ96I15 445 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 CALR3Q96L12 384 aaKnown RBP9.19□□□□□ -0.94
TRAF3-209ENST00000560463 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 PPP1R12CQ9BZL4 782 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 ISCUQ9H1K1 167 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 LZTFL1Q9NQ48 299 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 MIOSQ9NXC5 875 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 LRFN2Q9ULH4 789 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 PCDHGC3Q9UN70 934 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 POLIQ9UNA4 740 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 SNX9Q9Y5X1 595 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 PLXNA4Q9HCM2 1894 aa9.19□□□□□ -0.94
TRAF3-209ENST00000560463 A0A0A6YYK5 440 aaPredicted RBP9.18□□□□□ -0.94
TRAF3-209ENST00000560463 ANKRD62A6NC57 917 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 PODXLO00592 558 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 THAP12O43422 761 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 KIF5CO60282 957 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 HUS1O60921 280 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 CAPN15O75808 1086 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 POMCP01189 267 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 H2AFZP0C0S5 128 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 VDRP11473 427 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 RAD23BP54727 409 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 CDH8P55286 799 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 ETF1P62495 437 aaKnown RBP9.18□□□□□ -0.94
TRAF3-209ENST00000560463 UPP1Q16831 310 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 NOMO2Q5JPE7 1267 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 DENND4CQ5VZ89 1909 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 MFSD5Q6N075 450 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 H2AFVQ71UI9 128 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 UBE2Q1Q7Z7E8 422 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 ABI1Q8IZP0 508 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM199Q8N511 208 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 APPL2Q8NEU8 664 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 SLC20A1Q8WUM9 679 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 ZNF606Q8WXB4 792 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM176AQ96HP8 235 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 C16orf45Q96MC5 204 aaPredicted RBP9.18□□□□□ -0.94
TRAF3-209ENST00000560463 FAM193BQ96PV7 902 aaPredicted RBP9.18□□□□□ -0.94
TRAF3-209ENST00000560463 NT5C1AQ9BXI3 368 aa9.18□□□□□ -0.94
TRAF3-209ENST00000560463 MRPL9Q9BYD2 267 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 247.6 ms