RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 UBN1Q9NPG3 1134 aa11.34□□□□□ -0.59
CRTC3-209ENST00000560320 KLK14Q9P0G3 267 aa11.34□□□□□ -0.59
CRTC3-209ENST00000560320 OGDHLQ9ULD0 1010 aa11.34□□□□□ -0.59
CRTC3-209ENST00000560320 NENFQ9UMX5 172 aa11.34□□□□□ -0.59
CRTC3-209ENST00000560320 POLIQ9UNA4 740 aa11.34□□□□□ -0.59
CRTC3-209ENST00000560320 GIT1Q9Y2X7 761 aa11.34□□□□□ -0.59
CRTC3-209ENST00000560320 JRKLQ9Y4A0 524 aa11.34□□□□□ -0.59
CRTC3-209ENST00000560320 SMIM28A0A1B0GU29 152 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
CRTC3-209ENST00000560320 BUB1O43683 1085 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 TFRCP02786 760 aaKnown RBP11.33□□□□□ -0.6
CRTC3-209ENST00000560320 FTLP02792 175 aaPredicted RBP11.33□□□□□ -0.6
CRTC3-209ENST00000560320 PAEPP09466 180 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 WEE2P0C1S8 567 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 CD19P15391 556 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 CHRNB2P17787 502 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 ABCB4P21439 1286 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 ASPAP45381 313 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 NSFP46459 744 aaKnown RBP11.33□□□□□ -0.6
CRTC3-209ENST00000560320 GUCY2FP51841 1108 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 GPC5P78333 572 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 MTFR1Q15390 333 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 ZBTB6Q15916 424 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 CLEC16AQ2KHT3 1053 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 SV2CQ496J9 727 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 XKR4Q5GH76 650 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 GLRA4Q5JXX5 417 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 LIN9Q5TKA1 542 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 ACAD10Q6JQN1 1059 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 RFFLQ8WZ73 363 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 PACSIN1Q9BY11 444 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 ISCUQ9H1K1 167 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 MTMR10Q9NXD2 777 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 DUSP10Q9Y6W6 482 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 NCANO14594 1321 aa11.33□□□□□ -0.6
CRTC3-209ENST00000560320 MEFVO15553 781 aaPredicted RBP11.32□□□□□ -0.6
CRTC3-209ENST00000560320 ZNF623O75123 536 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 SLU7O95391 586 aaKnown RBP11.32□□□□□ -0.6
CRTC3-209ENST00000560320 ABL1P00519 1130 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 THP07101 528 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 MYBL1P10243 752 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 SELPP16109 830 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 TAF6P49848 677 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 C9orf57Q5W0N0 161 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 LRRC8DQ7L1W4 858 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 MRPL10Q7Z7H8 261 aaKnown RBP11.32□□□□□ -0.6
CRTC3-209ENST00000560320 UBR7Q8N806 425 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 RNF169Q8NCN4 708 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 MSANTD4Q8NCY6 345 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 MYRIPQ8NFW9 859 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
CRTC3-209ENST00000560320 C18orf25Q96B23 403 aaPredicted RBP11.32□□□□□ -0.6
CRTC3-209ENST00000560320 ZNF653Q96CK0 615 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 ZMAT2Q96NC0 199 aaKnown RBP11.32□□□□□ -0.6
CRTC3-209ENST00000560320 ADAM2Q99965 735 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 TRAIPQ9BWF2 469 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 FTHL17Q9BXU8 183 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 SMYD3Q9H7B4 428 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
CRTC3-209ENST00000560320 CTTNBP2NLQ9P2B4 639 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 KIAA1257Q9ULG3 409 aa11.32□□□□□ -0.6
CRTC3-209ENST00000560320 A0A0U1RQF3 1178 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 DCDC2CA8MYV0 355 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 PALMO75781 387 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 LSM8O95777 96 aaKnown RBP11.31□□□□□ -0.6
CRTC3-209ENST00000560320 VDRP11473 427 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
CRTC3-209ENST00000560320 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 CDK7P50613 346 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 ZNF132P52740 706 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 CKAP4Q07065 602 aaKnown RBP11.31□□□□□ -0.6
CRTC3-209ENST00000560320 DSC3Q14574 896 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 STILQ15468 1287 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 WHAMMP3Q1A5X7 153 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 ZNF394Q53GI3 561 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 NAA35Q5VZE5 725 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 TMEM35BQ8NCS4 154 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 UBE2Q2Q8WVN8 375 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 ZNF606Q8WXB4 792 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 PCDHB18PQ96TA0 734 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 ZNF518BQ9C0D4 1074 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 SNX25Q9H3E2 840 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 L2HGDHQ9H9P8 463 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
CRTC3-209ENST00000560320 TUBGCP4Q9UGJ1 667 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 CDC23Q9UJX2 597 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 BARX2Q9UMQ3 279 aaPredicted RBP11.31□□□□□ -0.6
CRTC3-209ENST00000560320 HYOU1Q9Y4L1 999 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 SNX9Q9Y5X1 595 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 SAR1BQ9Y6B6 198 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 CAPN6Q9Y6Q1 641 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 TANC1Q9C0D5 1861 aa11.31□□□□□ -0.6
CRTC3-209ENST00000560320 UQCRHLA0A096LP55 91 aa11.3□□□□□ -0.6
CRTC3-209ENST00000560320 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
CRTC3-209ENST00000560320 HUS1O60921 280 aa11.3□□□□□ -0.6
CRTC3-209ENST00000560320 CILPO75339 1184 aa11.3□□□□□ -0.6
CRTC3-209ENST00000560320 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms