RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TAF6P49848 677 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 WSCD1Q658N2 575 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 TPGS2Q68CL5 300 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 POTEHQ6S545 545 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 TCEAL8Q8IYN2 117 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 TTC9BQ8N6N2 239 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 RDH13Q8NBN7 331 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 OR10T2Q8NGX3 314 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 ASIC4Q96FT7 647 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 RTP3Q9BQQ7 232 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 MTMR12Q9C0I1 747 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 KCNK12Q9HB15 430 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 EXOC1Q9NV70 894 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 AFF4Q9UHB7 1163 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 SIX4Q9UIU6 781 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 AGAP1Q9UPQ3 857 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 SORCS3Q9UPU3 1222 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 INSL5Q9Y5Q6 135 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 UBE4BO95155 1302 aa12.58□□□□□ -0.4
RABGGTA-216ENST00000560243 KPNA7A9QM74 516 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 KIAA0391O15091 583 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 PDGFBP01127 241 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 CYP11A1P05108 521 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 POU2F2P09086 479 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 LAMP2P13473 410 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 ELF1P32519 619 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 NUCB2P80303 420 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 SIGLEC14Q08ET2 396 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 DPYDQ12882 1025 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 MTMR3Q13615 1198 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 SNRNP35Q16560 246 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 KNOP1Q1ED39 458 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 SLC5A9Q2M3M2 681 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 CSGALNACT2Q8N6G5 542 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 ATAD1Q8NBU5 361 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 ING5Q8WYH8 240 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 GZF1Q9H116 711 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 INTS13Q9NVM9 706 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 EPS15L1Q9UBC2 864 aa12.57□□□□□ -0.4
RABGGTA-216ENST00000560243 OR6C75A6NL08 312 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 NARSO43776 548 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 SOAT2O75908 522 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 ZNF202O95125 648 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 LRG1P02750 347 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 RHOP08100 348 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 KRT19P08727 400 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 BFSP1Q12934 665 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 DUSP4Q13115 394 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 SV2CQ496J9 727 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 PABPC1LQ4VXU2 614 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 RTL10Q7L3V2 364 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 HS2ST1Q7LGA3 356 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 XXYLT1Q8NBI6 393 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 CACTINQ8WUQ7 758 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 FGF13Q92913 245 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 CCDC127Q96BQ5 260 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 CORO1BQ9BR76 489 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 RPP25Q9BUL9 199 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 KCTD10Q9H3F6 313 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 CEP72Q9P209 647 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 ITGA11Q9UKX5 1188 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 SLC27A5Q9Y2P5 690 aa12.56□□□□□ -0.4
RABGGTA-216ENST00000560243 MTMR11A4FU01 709 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 ANHXE9PGG2 379 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 TMEM191BP0C7N4 346 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 DLATP10515 647 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 PAX3P23760 479 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 CCR2P41597 374 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 CYP24A1Q07973 514 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 TWF1Q12792 350 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 PSMD2Q13200 908 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 GPR17Q13304 367 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 TDGQ13569 410 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 HTR4Q13639 388 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 MYBPC2Q14324 1141 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 CENPPQ6IPU0 288 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 LRRTM3Q86VH5 581 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 C12orf56Q8IXR9 622 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 UBALD2Q8IYN6 164 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 FMR1NBQ8N0W7 255 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 PDCL2Q8N4E4 241 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 SLC44A3Q8N4M1 653 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 PLEKHO2Q8TD55 490 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 ZNF516Q92618 1163 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 PBXIP1Q96AQ6 731 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 TCEAL4Q96EI5 215 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 KIAA1586Q9HCI6 787 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 CDH7Q9ULB5 785 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 L1RE1Q9UN81 338 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 MRPS23Q9Y3D9 190 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 YIPF1Q9Y548 306 aa12.55□□□□□ -0.4
RABGGTA-216ENST00000560243 HCRTO43612 131 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 RHOBTB3O94955 611 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms