RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 NHSL1Q5SYE7 1610 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 ORC4O43929 436 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 ZFPL1O95159 310 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 GSPT1P15170 499 aaKnown RBP4.68□□□□□ -1.66
LRRC28-218ENST00000560236 PCSK1P29120 753 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 MCAMP43121 646 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 SCAND1P57086 179 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 NOMO3P69849 1222 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 MALLQ13021 153 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 STRN3Q13033 797 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 ANO4Q32M45 955 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 NOMO2Q5JPE7 1267 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 ZNF788Q6ZQV5 615 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 KCNK18Q7Z418 384 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 NPM2Q86SE8 214 aaKnown RBP4.68□□□□□ -1.66
LRRC28-218ENST00000560236 LMBR1Q8WVP7 490 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 CYFIP2Q96F07 1278 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 GSTO2Q9H4Y5 243 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 RUVBL1Q9Y265 456 aaKnown RBP4.68□□□□□ -1.66
LRRC28-218ENST00000560236 CLIP1P30622 1438 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 NWD1Q149M9 1564 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 UBR1Q8IWV7 1749 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 A2MP01023 1474 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 COL3A1P02461 1466 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-218ENST00000560236 PZPP20742 1482 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 LRP6O75581 1613 aa4.68□□□□□ -1.66
LRRC28-218ENST00000560236 INO80Q9ULG1 1556 aaPredicted RBP4.67□□□□□ -1.66
LRRC28-218ENST00000560236 CDHR4A6H8M9 788 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 YY2O15391 372 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 GPR32O75388 356 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 SF3B3Q15393 1217 aaKnown RBP4.67□□□□□ -1.66
LRRC28-218ENST00000560236 TOR2AQ5JU69 321 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 GGT6Q6P531 493 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.67□□□□□ -1.66
LRRC28-218ENST00000560236 JAZF1Q86VZ6 243 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 TBC1D15Q8TC07 691 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 CCHCR1Q8TD31 782 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 ORAI2Q96SN7 254 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 CPNE5Q9HCH3 593 aa4.67□□□□□ -1.66
LRRC28-218ENST00000560236 CFAP65Q6ZU64 1925 aaKnown RBP4.67□□□□□ -1.66
LRRC28-218ENST00000560236 RGS12O14924 1447 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 MIA2Q96PC5 1412 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 AHDC1Q5TGY3 1603 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-218ENST00000560236 TCRBV7S2A1N4TA0A589 114 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 CCDC151A5D8V7 595 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 CGB1A6NKQ9 187 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 GPD1P21695 349 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 YY1P25490 414 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 SLC6A9P48067 706 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 ZNF81P51508 661 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 SLC5A3P53794 718 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 PROK1P58294 105 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 SRSF2Q01130 221 aaKnown RBP4.66□□□□□ -1.66
LRRC28-218ENST00000560236 MGAT2Q10469 447 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 SEPT2Q15019 361 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 KAZNQ674X7 775 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 KIAA0895LQ68EN5 471 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 RNF180Q86T96 592 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.66□□□□□ -1.66
LRRC28-218ENST00000560236 TIMP4Q99727 224 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 ENTPD2Q9Y5L3 495 aa4.66□□□□□ -1.66
LRRC28-218ENST00000560236 CHD2O14647 1828 aaKnown RBP4.65□□□□□ -1.66
LRRC28-218ENST00000560236 TROQ12816 1431 aaPredicted RBP4.65□□□□□ -1.66
LRRC28-218ENST00000560236 KDM5AP29375 1690 aaKnown RBP4.65□□□□□ -1.66
LRRC28-218ENST00000560236 KIAA0391O15091 583 aaKnown RBP4.65□□□□□ -1.67
LRRC28-218ENST00000560236 FCER1AP12319 257 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 CREMQ03060 361 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 SLFN5Q08AF3 891 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 MTM1Q13496 603 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 TAF7LQ5H9L4 462 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 VWA1Q6PCB0 445 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 PTF1AQ7RTS3 328 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 UBR7Q8N806 425 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 SARAFQ96BY9 339 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 FBXL20Q96IG2 436 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 C1QTNF7Q9BXJ2 289 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 DNAJC28Q9NX36 388 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 CHD4Q14839 1912 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 MAP3K1Q13233 1512 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 SPAG9O60271 1321 aaKnown RBP4.65□□□□□ -1.67
LRRC28-218ENST00000560236 TIAM1Q13009 1591 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 MSH6P52701 1360 aa4.65□□□□□ -1.67
LRRC28-218ENST00000560236 NKTRP30414 1462 aaKnown RBP4.64□□□□□ -1.67
LRRC28-218ENST00000560236 SCAF11Q99590 1463 aaKnown RBP4.64□□□□□ -1.67
LRRC28-218ENST00000560236 LRRIQ1Q96JM4 1722 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 SLIT1O75093 1534 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 PRDM15P57071 1507 aaPredicted RBP4.64□□□□□ -1.67
LRRC28-218ENST00000560236 FAM171A2A8MVW0 826 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 PROB1E7EW31 1015 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 MPPED1O15442 326 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 AMY1AP04745 511 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 SRGNP10124 158 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 WT1P19544 449 aaPredicted RBP4.64□□□□□ -1.67
LRRC28-218ENST00000560236 DDCP20711 480 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 MAPK10P53779 464 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 TSTD2Q5T7W7 516 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 C1QL2Q7Z5L3 287 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 STRA8Q7Z7C7 330 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 PEG10Q86TG7 708 aaKnown RBP4.64□□□□□ -1.67
LRRC28-218ENST00000560236 Q8NA96 180 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms