RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 NOMO3P69849 1222 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 CKAP4Q07065 602 aaKnown RBP25.06■■□□□ 1.6
TM2D3-209ENST00000560013 FAM26DQ5JW98 314 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 PPP1R2P3Q6NXS1 205 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 CTAGE6Q86UF2 777 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 CTAGE4Q8IX94 777 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 MCOLN2Q8IZK6 566 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 LRRC52Q8N7C0 313 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 SH3TC2Q8TF17 1288 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 ANKRD7Q92527 254 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.06■■□□□ 1.6
TM2D3-209ENST00000560013 ERVK-5Q9HDB9 667 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 STARD7Q9NQZ5 370 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 RNF19AQ9NV58 838 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 PADI3Q9ULW8 664 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 PACSIN2Q9UNF0 486 aaPredicted RBP25.06■■□□□ 1.6
TM2D3-209ENST00000560013 MTA2O94776 668 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 PAEPP09466 180 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 CXCR5P32302 372 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 RPS6KA1Q15418 735 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 C9orf57Q5W0N0 161 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 RSRC2Q7L4I2 434 aaKnown RBP25.06■■□□□ 1.6
TM2D3-209ENST00000560013 PEX26Q7Z412 305 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 CREG2Q8IUH2 290 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 PASD1Q8IV76 773 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 SLC43A3Q8NBI5 491 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 COG1Q8WTW3 980 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 GOLGA1Q92805 767 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 TRIM11Q96F44 468 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 MMS19Q96T76 1030 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 PSMB7Q99436 277 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 ABCB6Q9NP58 842 aa25.06■■□□□ 1.6
TM2D3-209ENST00000560013 ATMINO43313 823 aaPredicted RBP25.05■■□□□ 1.6
TM2D3-209ENST00000560013 CAND2O75155 1236 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 CILPO75339 1184 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 GHRP10912 638 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 BRD2P25440 801 aaKnown RBP25.05■■□□□ 1.6
TM2D3-209ENST00000560013 SSTR3P32745 418 aaPredicted RBP25.05■■□□□ 1.6
TM2D3-209ENST00000560013 RAD23BP54727 409 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 NT5DC3Q86UY8 548 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 HACE1Q8IYU2 909 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 TTC39CQ8N584 583 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 WHAMMQ8TF30 809 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 ZSWIM1Q9BR11 485 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 OSBPL7Q9BZF2 842 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 UVRAGQ9P2Y5 699 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 CNOT8Q9UFF9 292 aaKnown RBP25.05■■□□□ 1.6
TM2D3-209ENST00000560013 STXBP5LQ9Y2K9 1186 aa25.05■■□□□ 1.6
TM2D3-209ENST00000560013 KIF4AO95239 1232 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 MYBL1P10243 752 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 CD52P31358 61 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 PAK2Q13177 524 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 ELF2Q15723 593 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 MTERF4Q7Z6M4 381 aaKnown RBP25.04■■□□□ 1.6
TM2D3-209ENST00000560013 TFAP2BQ92481 460 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 NUP85Q9BW27 656 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 AMFRQ9UKV5 643 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 PCDHGC3Q9UN70 934 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 A0A0U1RQG5 324 aaPredicted RBP25.04■■□□□ 1.6
TM2D3-209ENST00000560013 KBTBD13C9JR72 458 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 PPEF2O14830 753 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 CYP3A5P20815 502 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 TUBB4BP68371 445 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 INCA1Q0VD86 236 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 LPIN1Q14693 890 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 ZNF618Q5T7W0 954 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 PHF13Q86YI8 300 aaPredicted RBP25.04■■□□□ 1.6
TM2D3-209ENST00000560013 CAGE1Q8TC20 777 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 TMEM176AQ96HP8 235 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 VCPIP1Q96JH7 1222 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 CHORDC1Q9UHD1 332 aaPredicted RBP25.04■■□□□ 1.6
TM2D3-209ENST00000560013 PHF24Q9UPV7 400 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 SQORQ9Y6N5 450 aa25.04■■□□□ 1.6
TM2D3-209ENST00000560013 PIRO00625 290 aa25.03■■□□□ 1.6
TM2D3-209ENST00000560013 MED7O43513 233 aa25.03■■□□□ 1.6
TM2D3-209ENST00000560013 LSM8O95777 96 aaKnown RBP25.03■■□□□ 1.6
TM2D3-209ENST00000560013 ITGA4P13612 1032 aa25.03■■□□□ 1.6
TM2D3-209ENST00000560013 ATF7P17544 494 aaPredicted RBP25.03■■□□□ 1.6
TM2D3-209ENST00000560013 MON1BQ7L1V2 547 aa25.03■■□□□ 1.6
TM2D3-209ENST00000560013 USP38Q8NB14 1042 aa25.03■■□□□ 1.6
TM2D3-209ENST00000560013 SLC4A11Q8NBS3 891 aa25.03■■□□□ 1.6
TM2D3-209ENST00000560013 ZNF564Q8TBZ8 553 aaPredicted RBP25.03■■□□□ 1.6
TM2D3-209ENST00000560013 TRPV6Q9H1D0 765 aa25.03■■□□□ 1.6
TM2D3-209ENST00000560013 AVENQ9NQS1 362 aaPredicted RBP25.03■■□□□ 1.6
TM2D3-209ENST00000560013 BARX2Q9UMQ3 279 aaPredicted RBP25.03■■□□□ 1.6
TM2D3-209ENST00000560013 RRP9O43818 475 aaKnown RBP25.02■■□□□ 1.6
TM2D3-209ENST00000560013 CD19P15391 556 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 TEX35Q5T0J7 233 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 C11orf63Q6NUN7 778 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 RPGRIP1Q96KN7 1286 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 TWNKQ96RR1 684 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 ZNF518BQ9C0D4 1074 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 UNC93B1Q9H1C4 597 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 PTPN22Q9Y2R2 807 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 SNX9Q9Y5X1 595 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 PDE2AO00408 941 aaPredicted RBP25.02■■□□□ 1.6
TM2D3-209ENST00000560013 DNA2P51530 1060 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 TMEM35BQ8NCS4 154 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 TRAIPQ9BWF2 469 aa25.02■■□□□ 1.6
TM2D3-209ENST00000560013 ELOVL4Q9GZR5 314 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms