RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 NYAP1Q6ZVC0 841 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 MMS19Q96T76 1030 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 MRPL45Q9BRJ2 306 aaKnown RBP18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 SEPT11Q9NVA2 429 aaKnown RBP18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 NAGPAQ9UK23 515 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 PCDHA13Q9Y5I0 950 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 BZW2Q9Y6E2 419 aaKnown RBP18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 COL4A6Q14031 1691 aa18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 STAU1O95793 577 aaKnown RBP18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 CYP3A5P20815 502 aa18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 LRPAP1P30533 357 aa18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 PDE6CP51160 858 aa18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 PAN2Q504Q3 1202 aaKnown RBP18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 LRRC52Q8N7C0 313 aa18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 PGBD4Q96DM1 585 aa18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 FTHL17Q9BXU8 183 aa18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 ELOVL4Q9GZR5 314 aa18.53■□□□□ 0.56
CHRNA3-206ENST00000559658 TNNC1P63316 161 aa18.52■□□□□ 0.56
CHRNA3-206ENST00000559658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.52■□□□□ 0.56
CHRNA3-206ENST00000559658 ZNF280BQ86YH2 543 aa18.52■□□□□ 0.56
CHRNA3-206ENST00000559658 TFAP2BQ92481 460 aa18.52■□□□□ 0.56
CHRNA3-206ENST00000559658 ZSCAN12O43309 604 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 CSF2RAP15509 400 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 BRD2P25440 801 aaKnown RBP18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 GNA15P30679 374 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 LILRA4P59901 499 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 MYO1EQ12965 1108 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 SPA17Q15506 151 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 SOWAHAQ2M3V2 549 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 TMCO2Q7Z6W1 182 aaPredicted RBP18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 KIAA1328Q86T90 577 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 CRIPAKQ8N1N5 446 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 HASPINQ8TF76 798 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 JAKMIP2Q96AA8 810 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 FAM81BQ96LP2 452 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 SALL4Q9UJQ4 1053 aa18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 R3HCC1Q9Y3T6 440 aaKnown RBP18.52■□□□□ 0.55
CHRNA3-206ENST00000559658 FNDC1Q4ZHG4 1894 aaPredicted RBP18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 PTPRSQ13332 1948 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 PODXLO00592 558 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 XPOTO43592 962 aaKnown RBP18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 CILPO75339 1184 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 ITGB1P05556 798 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 SKIP12755 728 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 VAV2P52735 878 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 RAD23BP54727 409 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 CDR2Q01850 454 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 BMS1Q14692 1282 aaKnown RBP18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 CCDC122Q5T0U0 273 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 ALKBH5Q6P6C2 394 aaKnown RBP18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 PASD1Q8IV76 773 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 KBTBD7Q8WVZ9 684 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 LPIN3Q9BQK8 851 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 TMEM161AQ9NX61 479 aa18.51■□□□□ 0.55
CHRNA3-206ENST00000559658 KPNA7A9QM74 516 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 I3L4J1 428 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 INPPL1O15357 1258 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 DDHD2O94830 711 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 EOMESO95936 686 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 MAGEA1P43355 309 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 TAF6P49848 677 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 GRIK3Q13003 919 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 UPP1Q16831 310 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 CD300LGQ6UXG3 332 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 SLC4A11Q8NBS3 891 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 APBB2Q92870 758 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 TSPAN18Q96SJ8 248 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 SLC38A7Q9NVC3 462 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 PUF60Q9UHX1 559 aaKnown RBP18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 L1RE1Q9UN81 338 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 TIMP1P01033 207 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 CCDC172P0C7W6 258 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 ACRP10323 421 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 TNFAIP3P21580 790 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 CDR1P51861 262 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 NDST1P52848 882 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 KRT83P78385 493 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 INCA1Q0VD86 236 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 CCDC142Q17RM4 750 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 GLB1LQ6UWU2 654 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 ZNF560Q96MR9 790 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 DPEP3Q9H4B8 488 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 TBC1D13Q9NVG8 400 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 DNAJB4Q9UDY4 337 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 GUCA1BQ9UMX6 200 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 PAXBP1Q9Y5B6 917 aa18.5■□□□□ 0.55
CHRNA3-206ENST00000559658 KIAA0355O15063 1070 aa18.49■□□□□ 0.55
CHRNA3-206ENST00000559658 THAP12O43422 761 aa18.49■□□□□ 0.55
CHRNA3-206ENST00000559658 IPO7O95373 1038 aaKnown RBP18.49■□□□□ 0.55
CHRNA3-206ENST00000559658 NOMO2Q5JPE7 1267 aa18.49■□□□□ 0.55
CHRNA3-206ENST00000559658 OSTM1Q86WC4 334 aa18.49■□□□□ 0.55
CHRNA3-206ENST00000559658 MACROD2A1Z1Q3 448 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 TUSC3Q13454 348 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 ARHGAP29Q52LW3 1261 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 C2CD6Q53TS8 623 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 FMNL3Q8IVF7 1028 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 ZNF606Q8WXB4 792 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 CASD1Q96PB1 797 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 WDR24Q96S15 920 aa18.48■□□□□ 0.55
CHRNA3-206ENST00000559658 CYP3A43Q9HB55 503 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms