RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 GPR161Q8N6U8 529 aaKnown RBP14.25□□□□□ -0.13
TPM1-220ENST00000559556 SHKBP1Q8TBC3 707 aa14.25□□□□□ -0.13
TPM1-220ENST00000559556 ZSCAN18Q8TBC5 510 aaPredicted RBP14.25□□□□□ -0.13
TPM1-220ENST00000559556 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
TPM1-220ENST00000559556 BICD1Q96G01 975 aa14.25□□□□□ -0.13
TPM1-220ENST00000559556 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
TPM1-220ENST00000559556 LRRC3Q9BY71 257 aa14.25□□□□□ -0.13
TPM1-220ENST00000559556 ODF2LQ9ULJ1 636 aa14.25□□□□□ -0.13
TPM1-220ENST00000559556 PIAS3Q9Y6X2 628 aa14.25□□□□□ -0.13
TPM1-220ENST00000559556 GON4LQ3T8J9 2241 aa14.25□□□□□ -0.13
TPM1-220ENST00000559556 TNRC6BQ9UPQ9 1833 aaKnown RBP14.25□□□□□ -0.13
TPM1-220ENST00000559556 FRYQ5TBA9 3013 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 NPHP3-ACAD11A0A0J9YXS1 232 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 OR6C75A6NL08 312 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 HNRNPDLO14979 420 aaKnown RBP14.24□□□□□ -0.13
TPM1-220ENST00000559556 SLC26A4O43511 780 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 XPOTO43592 962 aaKnown RBP14.24□□□□□ -0.13
TPM1-220ENST00000559556 GJA1P17302 382 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 VIPR2P41587 438 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 MATR3P43243 847 aaKnown RBP eCLIP14.24□□□□□ -0.13
TPM1-220ENST00000559556 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
TPM1-220ENST00000559556 SPAG1Q07617 926 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 TEAD2Q15562 447 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 ENOX2Q16206 610 aaKnown RBP14.24□□□□□ -0.13
TPM1-220ENST00000559556 MCTP1Q6DN14 999 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 HAUS6Q7Z4H7 955 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 E2F7Q96AV8 911 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 AK8Q96MA6 479 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 TSPAN18Q96SJ8 248 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 REEP2Q9BRK0 252 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 GPR88Q9GZN0 384 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 DNAJC25Q9H1X3 360 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 CRISPLD1Q9H336 500 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 TIMM13Q9Y5L4 95 aaPredicted RBP14.24□□□□□ -0.13
TPM1-220ENST00000559556 CFAP47Q6ZTR5 3102 aa14.24□□□□□ -0.13
TPM1-220ENST00000559556 HEPACAM2A8MVW5 462 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 LACTBL1A8MY62 500 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 OGTO15294 1046 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 OR4Q2P0C623 313 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 TYMPP19971 482 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 LIG4P49917 911 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 ZNF131P52739 623 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 NRLP54845 237 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 FCHO2Q0JRZ9 810 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 GPR17Q13304 367 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 MYBPC2Q14324 1141 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 PPP2R5DQ14738 602 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 RSPO4Q2I0M5 234 aaPredicted RBP14.23□□□□□ -0.13
TPM1-220ENST00000559556 C8orf34Q49A92 452 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 OVOS1Q6IE37 1185 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 USP37Q86T82 979 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 FAM3CQ92520 227 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 SECISBP2LQ93073 1101 aaKnown RBP14.23□□□□□ -0.13
TPM1-220ENST00000559556 MSANTD3Q96H12 275 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 PGLYRP2Q96PD5 576 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 PLIN2Q99541 437 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 SLITRK6Q9H5Y7 841 aa14.23□□□□□ -0.13
TPM1-220ENST00000559556 A0A1W2PRU2 124 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 MTMR11A4FU01 709 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 PPEF2O14830 753 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 ZNF263O14978 683 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 CCR3P51677 355 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 GUCY2FP51841 1108 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 EPHB3P54753 998 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 LILRA4P59901 499 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 DUSP4Q13115 394 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 SPATA1Q5VX52 437 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 CENPPQ6IPU0 288 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 SLC39A4Q6P5W5 647 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 C1orf228Q6PIY5 440 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 LRRC15Q8TF66 581 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 RSPRY1Q96DX4 576 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 RPF1Q9H9Y2 349 aaKnown RBP14.22□□□□□ -0.13
TPM1-220ENST00000559556 HSFX1Q9UBD0 423 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 TBX20Q9UMR3 447 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 ASB3Q9Y575 518 aa14.22□□□□□ -0.13
TPM1-220ENST00000559556 A0A0B4J269 797 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 K7ENM7 598 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 CHADO15335 359 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 CHRNB1P11230 501 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 ODC1P11926 461 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 SDHBP21912 280 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 TGM1P22735 817 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 PAX3P23760 479 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 RABEP1Q15276 862 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 STXBP5Q5T5C0 1151 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 JADE1Q6IE81 842 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 DSTYKQ6XUX3 929 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 GAREM2Q75VX8 874 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 GPBP1Q86WP2 473 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 TTC9BQ8N6N2 239 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 PSMG2Q969U7 264 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 MKNK1Q9BUB5 465 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 LMAN1LQ9HAT1 526 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 PARVGQ9HBI0 331 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 BLOC1S4Q9NUP1 217 aa14.21□□□□□ -0.13
TPM1-220ENST00000559556 CPSF3Q9UKF6 684 aaKnown RBP14.21□□□□□ -0.13
TPM1-220ENST00000559556 ASCC3Q8N3C0 2202 aaKnown RBP14.21□□□□□ -0.14
TPM1-220ENST00000559556 ANO9A1A5B4 782 aa14.2□□□□□ -0.14
TPM1-220ENST00000559556 FAM13AO94988 1023 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms