RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 EXOC1Q9NV70 894 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 HCFC1R1Q9NWW0 138 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 AFF4Q9UHB7 1163 aaKnown RBP11.83□□□□□ -0.52
SPG11-216ENST00000559347 POLIQ9UNA4 740 aa11.83□□□□□ -0.52
SPG11-216ENST00000559347 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 A0A1W2PQD8 194 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 OR6C75A6NL08 312 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 PRRG1O14668 218 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 LRG1P02750 347 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 ITGB3P05106 788 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 MYL1P05976 194 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 FSHRP23945 695 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 POLR2BP30876 1174 aaKnown RBP11.82□□□□□ -0.52
SPG11-216ENST00000559347 ELF1P32519 619 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 SYKP43405 635 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 ADCY1Q08828 1119 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 SV2CQ496J9 727 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 PABPC1LQ4VXU2 614 aaKnown RBP11.82□□□□□ -0.52
SPG11-216ENST00000559347 RNF19BQ6ZMZ0 732 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 BMP8AQ7Z5Y6 402 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 FSIP1Q8NA03 581 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 KIAA0895Q8NCT3 520 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 MTMR12Q9C0I1 747 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 KCNK12Q9HB15 430 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.82□□□□□ -0.52
SPG11-216ENST00000559347 DNMT3BQ9UBC3 853 aaKnown RBP11.82□□□□□ -0.52
SPG11-216ENST00000559347 ITGA11Q9UKX5 1188 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 DUSP12Q9UNI6 340 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 HCN4Q9Y3Q4 1203 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 MUC6Q6W4X9 2439 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 KIF26AQ9ULI4 1882 aaPredicted RBP11.82□□□□□ -0.52
SPG11-216ENST00000559347 ZDBF2Q9HCK1 2354 aa11.82□□□□□ -0.52
SPG11-216ENST00000559347 MTMR11A4FU01 709 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 KPNA7A9QM74 516 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 TMEM191BP0C7N4 346 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 LAMP2P13473 410 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 PNPLA4P41247 253 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 SNRPFP62306 86 aaKnown RBP11.81□□□□□ -0.52
SPG11-216ENST00000559347 GPR17Q13304 367 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 TDGQ13569 410 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 HTR4Q13639 388 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 MYBPC2Q14324 1141 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
SPG11-216ENST00000559347 SLC5A9Q2M3M2 681 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 KMT5BQ4FZB7 885 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 LMBRD2Q68DH5 695 aaPredicted RBP11.81□□□□□ -0.52
SPG11-216ENST00000559347 HS2ST1Q7LGA3 356 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 LRRC52Q8N7C0 313 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 OR10T2Q8NGX3 314 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 CACTINQ8WUQ7 758 aaKnown RBP11.81□□□□□ -0.52
SPG11-216ENST00000559347 BORCS6Q96GS4 357 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 TMEM209Q96SK2 561 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 RTP3Q9BQQ7 232 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 CRISPLD1Q9H336 500 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 KIAA1586Q9HCI6 787 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 AVENQ9NQS1 362 aaPredicted RBP11.81□□□□□ -0.52
SPG11-216ENST00000559347 IGSF9Q9P2J2 1179 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 CGNQ9P2M7 1197 aaKnown RBP11.81□□□□□ -0.52
SPG11-216ENST00000559347 SIX4Q9UIU6 781 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 DSEQ9UL01 958 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 MAFFQ9ULX9 164 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 YIPF1Q9Y548 306 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 ZFP37Q9Y6Q3 630 aaPredicted RBP11.81□□□□□ -0.52
SPG11-216ENST00000559347 GREB1Q4ZG55 1949 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 MIA3Q5JRA6 1907 aa11.81□□□□□ -0.52
SPG11-216ENST00000559347 ZNF233A6NK53 670 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 CYB561D2O14569 222 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 CLIC2O15247 247 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 NARSO43776 548 aaKnown RBP11.8□□□□□ -0.52
SPG11-216ENST00000559347 PDGFBP01127 241 aaPredicted RBP11.8□□□□□ -0.52
SPG11-216ENST00000559347 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
SPG11-216ENST00000559347 RHOP08100 348 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 CYP2J2P51589 502 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 NUCB2P80303 420 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 DPYDQ12882 1025 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 STK4Q13043 487 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 PSMD2Q13200 908 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 SURF1Q15526 300 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 KNOP1Q1ED39 458 aaKnown RBP11.8□□□□□ -0.52
SPG11-216ENST00000559347 PRSS36Q5K4E3 855 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 SCARA3Q6AZY7 606 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 KRBA2Q6ZNG9 492 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 WDR49Q8IV35 697 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 NPAS3Q8IXF0 933 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 TTC9BQ8N6N2 239 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 XXYLT1Q8NBI6 393 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 OR5B17Q8NGF7 314 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 ITFG1Q8TB96 612 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 RSAD2Q8WXG1 361 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 FGF13Q92913 245 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 PBXIP1Q96AQ6 731 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 ANKRD36BP1Q96IX9 119 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 PGLYRP2Q96PD5 576 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 INTS13Q9NVM9 706 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 CDH7Q9ULB5 785 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 AGAP1Q9UPQ3 857 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 NUMBLQ9Y6R0 609 aa11.8□□□□□ -0.52
SPG11-216ENST00000559347 COL4A3Q01955 1670 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms