RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 PHLDB3Q6NSJ2 640 aa16.34■□□□□ 0.21
SMAD6-203ENST00000558937 BRSK2Q8IWQ3 736 aa16.34■□□□□ 0.21
SMAD6-203ENST00000558937 CCDC65Q8IXS2 484 aa16.34■□□□□ 0.21
SMAD6-203ENST00000558937 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
SMAD6-203ENST00000558937 ZNF512Q96ME7 567 aaPredicted RBP16.34■□□□□ 0.21
SMAD6-203ENST00000558937 TMEM209Q96SK2 561 aa16.34■□□□□ 0.21
SMAD6-203ENST00000558937 FAM213AQ9BRX8 229 aa16.34■□□□□ 0.21
SMAD6-203ENST00000558937 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
SMAD6-203ENST00000558937 MIA3Q5JRA6 1907 aa16.34■□□□□ 0.21
SMAD6-203ENST00000558937 CUTAO60888 179 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 MOSPD3O75425 235 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 MICAL2O94851 1124 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 PRPF6O94906 941 aaKnown RBP16.33■□□□□ 0.2
SMAD6-203ENST00000558937 F13A1P00488 732 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 MYL4P12829 197 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 GARTP22102 1010 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 FCARP24071 287 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 EPHA5P54756 1037 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 DUSP4Q13115 394 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 PLD1Q13393 1074 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 FOXD4L6Q3SYB3 417 aaPredicted RBP16.33■□□□□ 0.2
SMAD6-203ENST00000558937 CYP4A22Q5TCH4 519 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 TANGO2Q6ICL3 276 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 FOXD4L3Q6VB84 417 aaPredicted RBP16.33■□□□□ 0.2
SMAD6-203ENST00000558937 NT5DC4Q86YG4 428 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 LEMD2Q8NC56 503 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 OR10T2Q8NGX3 314 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 DHX58Q96C10 678 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 CBWD1Q9BRT8 395 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 PLA2G2FQ9BZM2 168 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 FOXQ1Q9C009 403 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 ASAH2Q9NR71 780 aa16.33■□□□□ 0.2
SMAD6-203ENST00000558937 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 CYB561D2O14569 222 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
SMAD6-203ENST00000558937 ZSCAN22P10073 491 aaPredicted RBP16.32■□□□□ 0.2
SMAD6-203ENST00000558937 GJA1P17302 382 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 STARD6P59095 220 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 MLF2Q15773 248 aaPredicted RBP16.32■□□□□ 0.2
SMAD6-203ENST00000558937 FAM78AQ5JUQ0 283 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 CENPPQ6IPU0 288 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 SHC4Q6S5L8 630 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 TTC9BQ8N6N2 239 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 ATAD1Q8NBU5 361 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 GLIS3Q8NEA6 775 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 ZNF560Q96MR9 790 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
SMAD6-203ENST00000558937 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 CUEDC2Q9H467 287 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 KBTBD4Q9NVX7 518 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 DSEQ9UL01 958 aa16.32■□□□□ 0.2
SMAD6-203ENST00000558937 TULP1O00294 542 aaPredicted RBP16.31■□□□□ 0.2
SMAD6-203ENST00000558937 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
SMAD6-203ENST00000558937 DCNP07585 359 aaKnown RBP16.31■□□□□ 0.2
SMAD6-203ENST00000558937 NBL1P41271 181 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 ASIC1P78348 528 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 TFAMQ00059 246 aaKnown RBP16.31■□□□□ 0.2
SMAD6-203ENST00000558937 PFKPQ01813 784 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 PRKCQQ04759 706 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 SNW1Q13573 536 aaKnown RBP16.31■□□□□ 0.2
SMAD6-203ENST00000558937 ANGPT1Q15389 498 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 TEAD2Q15562 447 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 ARMCX5Q6P1M9 558 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 METTL23Q86XA0 190 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 TMC8Q8IU68 726 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
SMAD6-203ENST00000558937 HPS3Q969F9 1004 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 ELSPBP1Q96BH3 223 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 BORCS6Q96GS4 357 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 SHDQ96IW2 340 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 FAM84AQ96KN4 292 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 LRRC3Q9BY71 257 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 LRRC27Q9C0I9 530 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 PCIF1Q9H4Z3 704 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 TMEM206Q9H813 350 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 RBAKQ9NYW8 714 aaPredicted RBP16.31■□□□□ 0.2
SMAD6-203ENST00000558937 DLGAP2Q9P1A6 1054 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 SLC27A5Q9Y2P5 690 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 SIT1Q9Y3P8 196 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 COL4A2P08572 1712 aa16.31■□□□□ 0.2
SMAD6-203ENST00000558937 PROB1E7EW31 1015 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 EXTL3O43909 919 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 GFRA3O60609 400 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 LRRN2O75325 713 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 SOAT2O75908 522 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 PDIA4P13667 645 aaKnown RBP16.3■□□□□ 0.2
SMAD6-203ENST00000558937 POLR2BP30876 1174 aaKnown RBP16.3■□□□□ 0.2
SMAD6-203ENST00000558937 ALDH1A3P47895 512 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 EPHB3P54753 998 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 PKP1Q13835 747 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 SV2CQ496J9 727 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 SLC39A12Q504Y0 691 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 SLC44A4Q53GD3 710 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 WSCD1Q658N2 575 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 STXBP4Q6ZWJ1 553 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 C1orf127Q8N9H9 656 aa16.3■□□□□ 0.2
SMAD6-203ENST00000558937 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms