RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CENPQQ7L2Z9 268 aaPredicted RBP10.73□□□□□ -0.69
SPG11-212ENST00000558790 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 SLC44A3Q8N4M1 653 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 ST13P5Q8NFI4 369 aaPredicted RBP10.73□□□□□ -0.69
SPG11-212ENST00000558790 SNX29Q8TEQ0 813 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 WHAMMQ8TF30 809 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 NSUN5Q96P11 429 aaKnown RBP10.73□□□□□ -0.69
SPG11-212ENST00000558790 APOL6Q9BWW8 343 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 SLKQ9H2G2 1235 aaPredicted RBP10.73□□□□□ -0.69
SPG11-212ENST00000558790 CHRDQ9H2X0 955 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 NXF3Q9H4D5 531 aaKnown RBP10.73□□□□□ -0.69
SPG11-212ENST00000558790 RXFP1Q9HBX9 757 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 AVENQ9NQS1 362 aaPredicted RBP10.73□□□□□ -0.69
SPG11-212ENST00000558790 ARHGEF3Q9NR81 526 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 DNAJB12Q9NXW2 375 aaKnown RBP10.73□□□□□ -0.69
SPG11-212ENST00000558790 KCNJ14Q9UNX9 436 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 PPME1Q9Y570 386 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 RALGAPA1Q6GYQ0 2036 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 UNC79Q9P2D8 2635 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 MYH11P35749 1972 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 CPLX1O14810 134 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 TGM5O43548 720 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 GAS2O43903 313 aaKnown RBP10.72□□□□□ -0.69
SPG11-212ENST00000558790 DKC1O60832 514 aaKnown RBP eCLIP10.72□□□□□ -0.69
SPG11-212ENST00000558790 P4HBP07237 508 aaKnown RBP10.72□□□□□ -0.69
SPG11-212ENST00000558790 DCNP07585 359 aaKnown RBP10.72□□□□□ -0.69
SPG11-212ENST00000558790 RPL17P18621 184 aaKnown RBP10.72□□□□□ -0.69
SPG11-212ENST00000558790 MAPK8P45983 427 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 CYP4A11Q02928 519 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 SPIRE1Q08AE8 756 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 HTR4Q13639 388 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 NCAPH2Q6IBW4 605 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 GALNT17Q6IS24 598 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 FUT10Q6P4F1 479 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 CYP26C1Q6V0L0 522 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 NEK8Q86SG6 692 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 PALB2Q86YC2 1186 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 C4orf19Q8IY42 314 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 SUMF1Q8NBK3 374 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 CNNM3Q8NE01 707 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 OR13H1Q8NG92 308 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 TCP11Q8WWU5 503 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 RUBCNQ92622 972 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 HAS1Q92839 578 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 CCDC51Q96ER9 411 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 FAM20AQ96MK3 541 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 GPR62Q9BZJ7 368 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 UBN1Q9NPG3 1134 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 XPNPEP1Q9NQW7 623 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 CHST7Q9NS84 486 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 MIOSQ9NXC5 875 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 RGL1Q9NZL6 768 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 DLGAP2Q9P1A6 1054 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 DPP7Q9UHL4 492 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 NUMBLQ9Y6R0 609 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 HELZ2Q9BYK8 2649 aaKnown RBP10.72□□□□□ -0.69
SPG11-212ENST00000558790 NAV2Q8IVL1 2488 aa10.72□□□□□ -0.69
SPG11-212ENST00000558790 CCDC194A0A1B0GVG4 234 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 ANHXE9PGG2 379 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 INO80B-WBP1J3KQ70 363 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 EREGO14944 169 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 LAMP2P13473 410 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 GCFC2P16383 781 aaKnown RBP10.71□□□□□ -0.69
SPG11-212ENST00000558790 ARF4P18085 180 aaPredicted RBP10.71□□□□□ -0.69
SPG11-212ENST00000558790 PSMA5P28066 241 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 PTENP60484 403 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 MBTD1Q05BQ5 628 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 STK3Q13188 491 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 CAPSQ13938 189 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 CTTNQ14247 550 aaKnown RBP10.71□□□□□ -0.69
SPG11-212ENST00000558790 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 PPP4R3AQ6IN85 833 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 RUFY3Q7L099 469 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 EXOC8Q8IYI6 725 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 FAM177A1Q8N128 213 aaPredicted RBP10.71□□□□□ -0.69
SPG11-212ENST00000558790 GOLGA6L1Q8N7Z2 621 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 GSTCDQ8NEC7 633 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 ASAP3Q8TDY4 903 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 HDAC7Q8WUI4 952 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 RABGGTAQ92696 567 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 NXPE3Q969Y0 559 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 ALKBH8Q96BT7 664 aaKnown RBP10.71□□□□□ -0.69
SPG11-212ENST00000558790 DYDC2Q96IM9 177 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 PHF20Q9BVI0 1012 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 FOXQ1Q9C009 403 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 TRIM6Q9C030 488 aaPredicted RBP10.71□□□□□ -0.69
SPG11-212ENST00000558790 NT5C3AQ9H0P0 336 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 CSRNP2Q9H175 543 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 PIDD1Q9HB75 910 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 ZDHHC7Q9NXF8 308 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 ADAM28Q9UKQ2 775 aa10.71□□□□□ -0.69
SPG11-212ENST00000558790 ZMYM2Q9UBW7 1377 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 ASAP2O43150 1006 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 B4GALT5O43286 388 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 CCNT1O60563 726 aaKnown RBP10.7□□□□□ -0.7
SPG11-212ENST00000558790 DTNBO60941 627 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 GLULP15104 373 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 AKAP5P24588 427 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms