RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 GCOM2Q9BZD3 368 aaPredicted RBP13.83□□□□□ -0.2
SMAD3-207ENST00000558763 CISHQ9NSE2 258 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 RBM12Q9NTZ6 932 aaKnown RBP13.83□□□□□ -0.2
SMAD3-207ENST00000558763 RNF14Q9UBS8 474 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 TMEM59LQ9UK28 342 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 KCNK3O14649 394 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CD4P01730 458 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 VSNL1P62760 191 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CDC42EP1Q00587 391 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 TLE2Q04725 743 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 SNX17Q15036 470 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 KYAT1Q16773 422 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 LRRC26Q2I0M4 334 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 TRIM71Q2Q1W2 868 aaKnown RBP13.82□□□□□ -0.2
SMAD3-207ENST00000558763 SMYD5Q6GMV2 418 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 MON1BQ7L1V2 547 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 EIF2AQ9BY44 585 aaKnown RBP13.82□□□□□ -0.2
SMAD3-207ENST00000558763 SDCBP2Q9H190 292 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 VRTNQ9H8Y1 702 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 POLIQ9UNA4 740 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 TRPV2Q9Y5S1 764 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CCDC151A5D8V7 595 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 TLR3O15455 904 aaKnown RBP13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CHRNA1P02708 482 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CKBP12277 381 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 EIF4BP23588 611 aaKnown RBP13.82□□□□□ -0.2
SMAD3-207ENST00000558763 GUCY2FP51841 1108 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 TRPC3Q13507 836 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 DCAF4L1Q3SXM0 396 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CFAP221Q4G0U5 840 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 ZNF618Q5T7W0 954 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CC2D1AQ6P1N0 951 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-207ENST00000558763 WDR93Q6P2C0 686 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 ANKRD33Q7Z3H0 272 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 RPAINQ86UA6 219 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CPNE8Q86YQ8 564 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 MCOLN2Q8IZK6 566 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 RASGEF1CQ8N431 466 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 TAF4BQ92750 862 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 ZNF653Q96CK0 615 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CYFIP2Q96F07 1278 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-207ENST00000558763 CTTNBP2NLQ9P2B4 639 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 C2CD2Q9Y426 696 aa13.82□□□□□ -0.2
SMAD3-207ENST00000558763 DCDC2CA8MYV0 355 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 SEC31AO94979 1220 aaKnown RBP13.81□□□□□ -0.2
SMAD3-207ENST00000558763 NPTXRO95502 500 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 ITGB3P05106 788 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 RPLP2P05387 115 aaKnown RBP13.81□□□□□ -0.2
SMAD3-207ENST00000558763 WEE2P0C1S8 567 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 CRYBB1P53674 252 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-207ENST00000558763 MGAT3Q09327 533 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 PCBP1Q15365 356 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMAD3-207ENST00000558763 NAA35Q5VZE5 725 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 LLGL2Q6P1M3 1020 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 SLC27A1Q6PCB7 646 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 SCARA5Q6ZMJ2 495 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 CATSPER4Q7RTX7 472 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 ZNF606Q8WXB4 792 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 CPA5Q8WXQ8 436 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 ALG3Q92685 438 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 CD101Q93033 1021 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 ZMAT2Q96NC0 199 aaKnown RBP13.81□□□□□ -0.2
SMAD3-207ENST00000558763 ACAP3Q96P50 834 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 NUP85Q9BW27 656 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 AMFRQ9UKV5 643 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 ALG6Q9Y672 507 aa13.81□□□□□ -0.2
SMAD3-207ENST00000558763 TARSL2A2RTX5 802 aaKnown RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 CD58P19256 250 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 SSTR3P32745 418 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 FAAP100Q0VG06 881 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 TMEM132DQ14C87 1099 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 BRD3Q15059 726 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 C1orf53Q5VUE5 145 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 ZNF564Q8TBZ8 553 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 ACTRT1Q8TDG2 376 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 WHAMMQ8TF30 809 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 TFAP2BQ92481 460 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 FAXDC2Q96IV6 333 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 PBKQ96KB5 322 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 BTBD6Q96KE9 485 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 SNX27Q96L92 541 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 ADPGKQ9BRR6 497 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 OSBPL7Q9BZF2 842 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 AVENQ9NQS1 362 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 UVRAGQ9P2Y5 699 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 CAPN2P17655 700 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 RRM1P23921 792 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 RAP1GAPP47736 663 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 MARCKSL1P49006 195 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 ZBTB6Q15916 424 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 UBXN11Q5T124 520 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 CCDC181Q5TID7 509 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 NOTUMQ6P988 496 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 ALKAL1Q6UXT8 129 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 TRIM72Q6ZMU5 477 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms