RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SPOPLQ6IQ16 392 aa18.74■□□□□ 0.59
TPM1-214ENST00000558544 RBM23Q86U06 439 aaKnown RBP18.74■□□□□ 0.59
TPM1-214ENST00000558544 GLYCTKQ8IVS8 523 aa18.74■□□□□ 0.59
TPM1-214ENST00000558544 FBXL13Q8NEE6 735 aa18.74■□□□□ 0.59
TPM1-214ENST00000558544 PI4K2AQ9BTU6 479 aa18.74■□□□□ 0.59
TPM1-214ENST00000558544 GDAP2Q9NXN4 497 aa18.74■□□□□ 0.59
TPM1-214ENST00000558544 L1RE1Q9UN81 338 aa18.74■□□□□ 0.59
TPM1-214ENST00000558544 SPTBN5Q9NRC6 3674 aaKnown RBP18.74■□□□□ 0.59
TPM1-214ENST00000558544 ARHGEF37A1IGU5 675 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 PER2O15055 1255 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 HUS1O60921 280 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 N4BP1O75113 896 aaKnown RBP18.73■□□□□ 0.59
TPM1-214ENST00000558544 CNPP09543 421 aaKnown RBP18.73■□□□□ 0.59
TPM1-214ENST00000558544 PRKCSHP14314 528 aaPredicted RBP18.73■□□□□ 0.59
TPM1-214ENST00000558544 TYMPP19971 482 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 EEF1GP26641 437 aaKnown RBP18.73■□□□□ 0.59
TPM1-214ENST00000558544 YWHAHQ04917 246 aaPredicted RBP18.73■□□□□ 0.59
TPM1-214ENST00000558544 MAN2A1Q16706 1144 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 SGSM1Q2NKQ1 1148 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 WDR72Q3MJ13 1102 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 TCP11X2Q5H9J9 407 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 WSCD1Q658N2 575 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 PDXDC1Q6P996 788 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 LRSAM1Q6UWE0 723 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 ANKS3Q6ZW76 656 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 SEMA4DQ92854 862 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 PPP2R3CQ969Q6 453 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 IMPG2Q9BZV3 1241 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 VRTNQ9H8Y1 702 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 RXFP1Q9HBX9 757 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 CBX8Q9HC52 389 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.73■□□□□ 0.59
TPM1-214ENST00000558544 NXF1Q9UBU9 619 aaKnown RBP18.73■□□□□ 0.59
TPM1-214ENST00000558544 POLIQ9UNA4 740 aa18.73■□□□□ 0.59
TPM1-214ENST00000558544 SMTNL1A8MU46 457 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 TEX28O15482 410 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 ASS1P00966 412 aaKnown RBP18.72■□□□□ 0.59
TPM1-214ENST00000558544 CYP11A1P05108 521 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 GTF2F1P35269 517 aaKnown RBP eCLIP18.72■□□□□ 0.59
TPM1-214ENST00000558544 NRIP1P48552 1158 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 TNNC1P63316 161 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 IQCB1Q15051 598 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 CCDC85BQ15834 202 aaPredicted RBP18.72■□□□□ 0.59
TPM1-214ENST00000558544 ZNF667Q5HYK9 610 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 OVOS1Q6IE37 1185 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 ZNF280DQ6N043 979 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 SCARA5Q6ZMJ2 495 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 GPR65Q8IYL9 337 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 PDCL2Q8N4E4 241 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 TOP6BLQ8N6T0 577 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 KLHL5Q96PQ7 755 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 MMS19Q96T76 1030 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 TUBGCP2Q9BSJ2 902 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 EMILIN2Q9BXX0 1053 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 HSD3B7Q9H2F3 369 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 IGFLR1Q9H665 355 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 TLE6Q9H808 572 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 RAB20Q9NX57 234 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 MTRRQ9UBK8 725 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 DSEQ9UL01 958 aa18.72■□□□□ 0.59
TPM1-214ENST00000558544 BECN2A8MW95 431 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 H7C4K7 107 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 NOP14P78316 857 aaKnown RBP18.71■□□□□ 0.59
TPM1-214ENST00000558544 CREMQ03060 361 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 HYAL1Q12794 435 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 MRPL58Q14197 206 aaKnown RBP18.71■□□□□ 0.59
TPM1-214ENST00000558544 SOWAHAQ2M3V2 549 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 CTXN3Q4LDR2 81 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 RSPO2Q6UXX9 243 aaPredicted RBP18.71■□□□□ 0.59
TPM1-214ENST00000558544 METTL23Q86XA0 190 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 ADGRF2Q8IZF7 708 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 CCDC150Q8NCX0 1101 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 PPM1EQ8WY54 764 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 TAF4BQ92750 862 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 TSPY26PQ9H489 355 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 APOBEC3GQ9HC16 384 aaKnown RBP18.71■□□□□ 0.59
TPM1-214ENST00000558544 TAB2Q9NYJ8 693 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 FNIP2Q9P278 1114 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 COQ4Q9Y3A0 265 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 CDY1Q9Y6F8 540 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 PRUNE2Q8WUY3 3088 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 COL6A3P12111 3177 aa18.71■□□□□ 0.59
TPM1-214ENST00000558544 P4HA2O15460 535 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 ADAM12O43184 909 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 CLASP2O75122 1294 aaKnown RBP18.7■□□□□ 0.58
TPM1-214ENST00000558544 OAZ2O95190 189 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 ZNF18P17022 549 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 RAP1GAPP47736 663 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 NDUFV1P49821 464 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 KRT31Q15323 416 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 DUSP6Q16828 381 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 MIIPQ5JXC2 388 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 LUZP1Q86V48 1076 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 OSTM1Q86WC4 334 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 CLSTN3Q9BQT9 956 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 SMYD3Q9H7B4 428 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 FBXL5Q9UKA1 691 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 BACE2Q9Y5Z0 518 aa18.7■□□□□ 0.58
TPM1-214ENST00000558544 PES1O00541 588 aaKnown RBP18.69■□□□□ 0.58
TPM1-214ENST00000558544 PMM2O15305 246 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms