RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PCDH18Q9HCL0 1135 aa11.83□□□□□ -0.52
PCAT29-201ENST00000558411 TBCCD1Q9NVR7 557 aa11.83□□□□□ -0.52
PCAT29-201ENST00000558411 SH3GLB1Q9Y371 365 aa11.83□□□□□ -0.52
PCAT29-201ENST00000558411 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 A0A1W2PPM1 405 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 CAPN14A8MX76 684 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 P4HA2O15460 535 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 ZNF862O60290 1169 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 NTSR2O95665 410 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 ATP5BP06576 529 aaKnown RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 KRT4P19013 534 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 YY1P25490 414 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 RPL5P46777 297 aaKnown RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 CHN2P52757 468 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 ADARP55265 1226 aaKnown RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 PHEXP78562 749 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 OVGP1Q12889 678 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 ADRM1Q16186 407 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 CLEC16AQ2KHT3 1053 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 USH1GQ495M9 461 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 EFHC2Q5JST6 749 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 DHDDSQ86SQ9 333 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 CPNE8Q86YQ8 564 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 PASD1Q8IV76 773 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 SLC44A5Q8NCS7 719 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 RSPH1Q8WYR4 309 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 GLT8D2Q9H1C3 349 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 FBXO6Q9NRD1 293 aaPredicted RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 PLK2Q9NYY3 685 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 NOCTQ9UK39 431 aaKnown RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 COL24A1Q17RW2 1714 aa11.82□□□□□ -0.52
PCAT29-201ENST00000558411 DDX60LQ5H9U9 1706 aaKnown RBP11.82□□□□□ -0.52
PCAT29-201ENST00000558411 USP17L5A8MUK1 530 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 VILLO15195 856 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 CAMTA2O94983 1202 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 BAG2O95816 211 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 VCLP18206 1134 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 MAGEA10P43363 369 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 VPS41P49754 854 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 SERPINB8P50452 374 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 IRX4P78413 519 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 CETN1Q12798 172 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 CBX3Q13185 183 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 KLF1Q13351 362 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 DCTN2Q13561 401 aaKnown RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 DDB1Q16531 1140 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 UBE2SQ16763 222 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 OLFML2BQ68BL8 750 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 C16orf86Q6ZW13 317 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 RAPH1Q70E73 1250 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 CENPUQ71F23 418 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 PRR11Q96HE9 360 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 BTBD6Q96KE9 485 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 TTC1Q99614 292 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 KLHL4Q9C0H6 718 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 TMEM165Q9HC07 324 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 S100A14Q9HCY8 104 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 UBE2TQ9NPD8 197 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 CLIC5Q9NZA1 410 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 PPM1HQ9ULR3 514 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 PAIP2BQ9ULR5 123 aaKnown RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 COL5A2P05997 1499 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 DNALI1O14645 258 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 TBX3O15119 743 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 ALOX15BO15296 676 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 BIRC5O15392 142 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 ATMINO43313 823 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 HNRNPCP07910 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 PSMC6P62333 389 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 CDK18Q07002 472 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 SPIRE1Q08AE8 756 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 KCNA1Q09470 495 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 BFSP1Q12934 665 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 TMED1Q13445 227 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 MYBPC2Q14324 1141 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 PDK3Q15120 406 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 PRKD1Q15139 912 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 ANKRD20A4Q4UJ75 823 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 C1orf146Q5VVC0 180 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 UGT2A3Q6UWM9 527 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 SMYD1Q8NB12 490 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 EPS8L1Q8TE68 723 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 MTBPQ96DY7 904 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 ZFRQ96KR1 1074 aaKnown RBP11.81□□□□□ -0.52
PCAT29-201ENST00000558411 SETDB2Q96T68 719 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 KCNK4Q9NYG8 393 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 SLC7A8Q9UHI5 535 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 TAGLN3Q9UI15 199 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 MINPP1Q9UNW1 487 aa11.81□□□□□ -0.52
PCAT29-201ENST00000558411 RSPH10B2B2RC85 870 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 SPECC1L-ADORA2AF8WAN1 911 aa11.8□□□□□ -0.52
PCAT29-201ENST00000558411 H3BRJ5 948 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms