RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CDH5P33151 784 aaPredicted RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 PTPN7P35236 360 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 TCF7P36402 384 aaPredicted RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 MAGEA9P43362 315 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PLTPP55058 493 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 NLRP11P59045 1033 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 NOMO3P69849 1222 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 NOP14P78316 857 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 TNFAIP2Q03169 654 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PPIL2Q13356 520 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 ZNF211Q13398 564 aaPredicted RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 DRP2Q13474 957 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PTK6Q13882 451 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PIGHQ14442 188 aaPredicted RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 KCTD2Q14681 263 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 ACAP1Q15027 740 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PPP1R7Q15435 360 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 FAM187BQ17R55 369 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 KRT71Q3SY84 523 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 SGO2Q562F6 1265 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 ZNF484Q5JVG2 852 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 CELF3Q5SZQ8 465 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 MFSD5Q6N075 450 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 TAOK1Q7L7X3 1001 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 TAX1BP1Q86VP1 789 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 DDX42Q86XP3 938 aaKnown RBP eCLIP8.84□□□□□ -0.99
SPG11-209ENST00000558253 RBBP8NLQ8NC74 664 aaPredicted RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 FEZF2Q8TBJ5 459 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 TRPM4Q8TD43 1214 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PRPF31Q8WWY3 499 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 PPM1EQ8WY54 764 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 TLCD1Q96CP7 247 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 SNF8Q96H20 258 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 ACO2Q99798 780 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 CCDC77Q9BR77 488 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 TARS2Q9BW92 718 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 TRAIPQ9BWF2 469 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 CELF4Q9BZC1 486 aaKnown RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 CCDC113Q9H0I3 377 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 LHX5Q9H2C1 402 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 DPH5Q9H2P9 285 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PPCSQ9HAB8 311 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 TOPORSQ9NS56 1045 aaPredicted RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 GRHL1Q9NZI5 618 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 WDR35Q9P2L0 1181 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PPP1R1BQ9UD71 204 aaPredicted RBP8.84□□□□□ -0.99
SPG11-209ENST00000558253 KIAA1257Q9ULG3 409 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 PCDHGC3Q9UN70 934 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 AGTPBP1Q9UPW5 1226 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 KCNH4Q9UQ05 1017 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 SNX24Q9Y343 169 aa8.84□□□□□ -0.99
SPG11-209ENST00000558253 LOC285556D6RIA3 1793 aa8.84□□□□□ -1
SPG11-209ENST00000558253 GRIN2DO15399 1336 aa8.83□□□□□ -1
SPG11-209ENST00000558253 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
SPG11-209ENST00000558253 GMNCA6NCL1 334 aa8.83□□□□□ -1
SPG11-209ENST00000558253 MSCO60682 206 aa8.83□□□□□ -1
SPG11-209ENST00000558253 TCEA3O75764 348 aa8.83□□□□□ -1
SPG11-209ENST00000558253 KIAA0754O94854 1291 aa8.83□□□□□ -1
SPG11-209ENST00000558253 TJP3O95049 919 aa8.83□□□□□ -1
SPG11-209ENST00000558253 WEE2P0C1S8 567 aa8.83□□□□□ -1
SPG11-209ENST00000558253 P4HA1P13674 534 aa8.83□□□□□ -1
SPG11-209ENST00000558253 MMP8P22894 467 aa8.83□□□□□ -1
SPG11-209ENST00000558253 RRM1P23921 792 aa8.83□□□□□ -1
SPG11-209ENST00000558253 ATICP31939 592 aa8.83□□□□□ -1
SPG11-209ENST00000558253 ACOT2P49753 483 aa8.83□□□□□ -1
SPG11-209ENST00000558253 HIRAP54198 1017 aaPredicted RBP8.83□□□□□ -1
SPG11-209ENST00000558253 SOX10P56693 466 aa8.83□□□□□ -1
SPG11-209ENST00000558253 GSCP56915 257 aaPredicted RBP8.83□□□□□ -1
SPG11-209ENST00000558253 CDC42EP1Q00587 391 aa8.83□□□□□ -1
SPG11-209ENST00000558253 CNTN2Q02246 1040 aa8.83□□□□□ -1
SPG11-209ENST00000558253 SP4Q02446 784 aa8.83□□□□□ -1
SPG11-209ENST00000558253 LAMTOR4Q0VGL1 99 aa8.83□□□□□ -1
SPG11-209ENST00000558253 MAMLD1Q13495 774 aa8.83□□□□□ -1
SPG11-209ENST00000558253 TRPC3Q13507 836 aa8.83□□□□□ -1
SPG11-209ENST00000558253 CAPSQ13938 189 aa8.83□□□□□ -1
SPG11-209ENST00000558253 SIX1Q15475 284 aaPredicted RBP8.83□□□□□ -1
SPG11-209ENST00000558253 TRADDQ15628 312 aa8.83□□□□□ -1
SPG11-209ENST00000558253 NAA35Q5VZE5 725 aa8.83□□□□□ -1
SPG11-209ENST00000558253 MPZL3Q6UWV2 235 aa8.83□□□□□ -1
SPG11-209ENST00000558253 ZDHHC24Q6UX98 284 aa8.83□□□□□ -1
SPG11-209ENST00000558253 TRMT1LQ7Z2T5 733 aaKnown RBP8.83□□□□□ -1
SPG11-209ENST00000558253 APBB1IPQ7Z5R6 666 aaPredicted RBP8.83□□□□□ -1
SPG11-209ENST00000558253 NCAPG2Q86XI2 1143 aa8.83□□□□□ -1
SPG11-209ENST00000558253 NT5DC4Q86YG4 428 aa8.83□□□□□ -1
SPG11-209ENST00000558253 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
SPG11-209ENST00000558253 UBR7Q8N806 425 aa8.83□□□□□ -1
SPG11-209ENST00000558253 NIPA2Q8N8Q9 360 aa8.83□□□□□ -1
SPG11-209ENST00000558253 FBXO25Q8TCJ0 367 aa8.83□□□□□ -1
SPG11-209ENST00000558253 GLG1Q92896 1179 aa8.83□□□□□ -1
SPG11-209ENST00000558253 C18orf8Q96DM3 657 aa8.83□□□□□ -1
SPG11-209ENST00000558253 ANKRD36BP1Q96IX9 119 aa8.83□□□□□ -1
SPG11-209ENST00000558253 SERPINB12Q96P63 405 aa8.83□□□□□ -1
SPG11-209ENST00000558253 PCYT2Q99447 389 aa8.83□□□□□ -1
SPG11-209ENST00000558253 GPR20Q99678 358 aa8.83□□□□□ -1
SPG11-209ENST00000558253 TRIM51Q9BSJ1 452 aa8.83□□□□□ -1
SPG11-209ENST00000558253 TCHPQ9BT92 498 aa8.83□□□□□ -1
SPG11-209ENST00000558253 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
SPG11-209ENST00000558253 NEUROG2Q9H2A3 272 aa8.83□□□□□ -1
SPG11-209ENST00000558253 FZD8Q9H461 694 aa8.83□□□□□ -1
SPG11-209ENST00000558253 BTBD7Q9P203 1132 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms