RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 RALGAPA2Q2PPJ7 1873 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 ZC3H11AO75152 810 aaKnown RBP eCLIP13□□□□□ -0.33
HMGB1P8-201ENST00000558211 IL18RAPO95256 599 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 NFICP08651 508 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 KRT13P13646 458 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 TNNI1P19237 187 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 PBX3P40426 434 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 GUCY2FP51841 1108 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 TFAMQ00059 246 aaKnown RBP13□□□□□ -0.33
HMGB1P8-201ENST00000558211 GRIK3Q13003 919 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
HMGB1P8-201ENST00000558211 RAB30Q15771 203 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 C4orf17Q53FE4 359 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 TMEM214Q6NUQ4 689 aaKnown RBP13□□□□□ -0.33
HMGB1P8-201ENST00000558211 CD302Q8IX05 232 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 LRRC43Q8N309 656 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 C18orf25Q96B23 403 aaPredicted RBP13□□□□□ -0.33
HMGB1P8-201ENST00000558211 MFSD14AQ96MC6 490 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 CEP63Q96MT8 703 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 POP1Q99575 1024 aaKnown RBP13□□□□□ -0.33
HMGB1P8-201ENST00000558211 NAT10Q9H0A0 1025 aaKnown RBP13□□□□□ -0.33
HMGB1P8-201ENST00000558211 CWH43Q9H720 699 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 NRDE2Q9H7Z3 1164 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 MMRN2Q9H8L6 949 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 CERS4Q9HA82 394 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 RC3H2Q9HBD1 1191 aaKnown RBP13□□□□□ -0.33
HMGB1P8-201ENST00000558211 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 CNTN3Q9P232 1028 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 DNAJB4Q9UDY4 337 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 MTUS1Q9ULD2 1270 aa13□□□□□ -0.33
HMGB1P8-201ENST00000558211 COL4A6Q14031 1691 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 A0A1W2PPC1 479 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 LINC01553A4QN01 128 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 CASTOR2A6NHX0 329 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 NT5C1B-RDH14C9J2C7 533 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 B4GALT3O60512 393 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 ARHGEF15O94989 841 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 FGFR1OPO95684 399 aaKnown RBP12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 KCNE1P15382 129 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 OR1G1P47890 313 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 TMEM132DQ14C87 1099 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 PSMD6Q15008 389 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 SURF1Q15526 300 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 XKR4Q5GH76 650 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 CT47A1Q5JQC4 288 aaPredicted RBP12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 TCERG1LQ5VWI1 586 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 FILIP1Q7Z7B0 1213 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 NPAS3Q8IXF0 933 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 EFCAB13Q8IY85 973 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 AOPEPQ8N6M6 819 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 PLEKHO2Q8TD55 490 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 ZNF775Q96BV0 537 aaPredicted RBP12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 PPP1R10Q96QC0 940 aaKnown RBP12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 ASB7Q9H672 318 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 TUBGCP4Q9UGJ1 667 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 TRIOBPQ9H2D6 2365 aa12.99□□□□□ -0.33
HMGB1P8-201ENST00000558211 NLRC5Q86WI3 1866 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 INPPL1O15357 1258 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 ALDH2P05091 517 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 TMEM191BP0C7N4 346 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 TRIM49P0CI25 452 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 TRIM49CP0CI26 452 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 ZNF165P49910 485 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 VAMP7P51809 220 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 BCAR1P56945 870 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 DLG4P78352 724 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 SMAD3P84022 425 aaKnown RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 POU5F1Q01860 360 aaKnown RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 SOX4Q06945 474 aaPredicted RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 TUSC3Q13454 348 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 LRIT3Q3SXY7 679 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 DCAF17Q5H9S7 520 aaPredicted RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 SPATA1Q5VX52 437 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 ZC3H3Q8IXZ2 948 aaKnown RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 COLGALT2Q8IYK4 626 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 ENOX1Q8TC92 643 aaKnown RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 PARD3BQ8TEW8 1205 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 CACTINQ8WUQ7 758 aaKnown RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 TMEM174Q8WUU8 243 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 TIFAQ96CG3 184 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 ANKRD36BP1Q96IX9 119 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 PAAF1Q9BRP4 392 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 C17orf80Q9BSJ5 609 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 SLC28A3Q9HAS3 691 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 SAMSN1Q9NSI8 373 aaKnown RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 SLC38A7Q9NVC3 462 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 UBQLN1Q9UMX0 589 aaKnown RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 FAN1Q9Y2M0 1017 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 PRG3Q9Y2Y8 225 aaPredicted RBP12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
HMGB1P8-201ENST00000558211 PTPRJQ12913 1337 aa12.97□□□□□ -0.33
HMGB1P8-201ENST00000558211 LRRIQ3A6PVS8 624 aaPredicted RBP12.97□□□□□ -0.33
HMGB1P8-201ENST00000558211 NRP1O14786 923 aa12.97□□□□□ -0.33
HMGB1P8-201ENST00000558211 SLC16A3O15427 465 aaKnown RBP12.97□□□□□ -0.33
HMGB1P8-201ENST00000558211 TNNC2P02585 160 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms