RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 LUC7LQ9NQ29 371 aaKnown RBP13.28□□□□□ -0.28
TPM1-209ENST00000558072 ABHD10Q9NUJ1 306 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 NXF1Q9UBU9 619 aaKnown RBP13.28□□□□□ -0.28
TPM1-209ENST00000558072 FHOD1Q9Y613 1164 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 TDRD15B5MCY1 1934 aaKnown RBP13.28□□□□□ -0.28
TPM1-209ENST00000558072 F8VZ95 297 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 F8W810 466 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 TADA2AO75478 443 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 IPO7O95373 1038 aaKnown RBP13.27□□□□□ -0.29
TPM1-209ENST00000558072 GJB5O95377 273 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 SERPING1P05155 500 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 OR1G1P47890 313 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 KLK7P49862 253 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 FXR1P51114 621 aaKnown RBP eCLIP13.27□□□□□ -0.29
TPM1-209ENST00000558072 CLCNKBP51801 687 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 JAM2P57087 298 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 BTG3Q14201 252 aaPredicted RBP13.27□□□□□ -0.29
TPM1-209ENST00000558072 BMS1Q14692 1282 aaKnown RBP13.27□□□□□ -0.29
TPM1-209ENST00000558072 STILQ15468 1287 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 PTPN21Q16825 1174 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 ARHGAP44Q17R89 818 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 SPOUT1Q5T280 376 aaKnown RBP13.27□□□□□ -0.29
TPM1-209ENST00000558072 RASIP1Q5U651 963 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 ZNF677Q86XU0 584 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 BAP1Q92560 729 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 TATDN2Q93075 761 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 ZNF689Q96CS4 500 aaPredicted RBP13.27□□□□□ -0.29
TPM1-209ENST00000558072 PI4K2AQ9BTU6 479 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.27□□□□□ -0.29
TPM1-209ENST00000558072 BARX2Q9UMQ3 279 aaPredicted RBP13.27□□□□□ -0.29
TPM1-209ENST00000558072 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 SNX9Q9Y5X1 595 aa13.27□□□□□ -0.29
TPM1-209ENST00000558072 SSU72P8A0A1W2PR75 194 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 CASTOR2A6NHX0 329 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 LRRC53A6NM62 1247 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 CYB561D2O14569 222 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 PPEF2O14830 753 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 SYN3O14994 580 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 MED7O43513 233 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 SF3B1O75533 1304 aaKnown RBP eCLIP13.26□□□□□ -0.29
TPM1-209ENST00000558072 PAEPP09466 180 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 KRT5P13647 590 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 ATP2A2P16615 1042 aaKnown RBP13.26□□□□□ -0.29
TPM1-209ENST00000558072 TYMPP19971 482 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 CYLC1P35663 651 aaPredicted RBP13.26□□□□□ -0.29
TPM1-209ENST00000558072 PBX2P40425 430 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 PRKCIP41743 596 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 AARSP49588 968 aaKnown RBP eCLIP13.26□□□□□ -0.29
TPM1-209ENST00000558072 ADKP55263 362 aaKnown RBP13.26□□□□□ -0.29
TPM1-209ENST00000558072 HTRA4P83105 476 aaPredicted RBP13.26□□□□□ -0.29
TPM1-209ENST00000558072 KLHL30Q0D2K2 578 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 DPY19L2P1Q6NXN4 242 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 ZNF280BQ86YH2 543 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 ARHGEF19Q8IW93 802 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 LRRC8AQ8IWT6 810 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 FAM71AQ8IYT1 594 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 THEM5Q8N1Q8 247 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 FIBCD1Q8N539 461 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 TC2NQ8N9U0 490 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 TNIP3Q96KP6 325 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 ZNF558Q96NG5 402 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
TPM1-209ENST00000558072 PAAF1Q9BRP4 392 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 SNX25Q9H3E2 840 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 DEF6Q9H4E7 631 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 NRDE2Q9H7Z3 1164 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 RC3H2Q9HBD1 1191 aaKnown RBP13.26□□□□□ -0.29
TPM1-209ENST00000558072 APOBEC3GQ9HC16 384 aaKnown RBP13.26□□□□□ -0.29
TPM1-209ENST00000558072 CISHQ9NSE2 258 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 CNTN6Q9UQ52 1028 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 PCDHB12Q9Y5F1 795 aa13.26□□□□□ -0.29
TPM1-209ENST00000558072 M0QZQ0 153 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 LRRN2O75325 713 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 DDHD2O94830 711 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 WARSP23381 471 aaKnown RBP13.25□□□□□ -0.29
TPM1-209ENST00000558072 PCSK1P29120 753 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 USP8P40818 1118 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 ASPAP45381 313 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 PDE6CP51160 858 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 INCA1Q0VD86 236 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 MAPRE1Q15691 268 aaKnown RBP13.25□□□□□ -0.29
TPM1-209ENST00000558072 MEA1Q16626 185 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 SPOPLQ6IQ16 392 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 HERC6Q8IVU3 1022 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 SUSD3Q96L08 255 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 SENP8Q96LD8 212 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 CCDC42Q96M95 316 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 SAMD11Q96NU1 681 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 NT5C1AQ9BXI3 368 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 ADAM28Q9UKQ2 775 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 PCDHB8Q9UN66 801 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 SSX2IPQ9Y2D8 614 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 YBX2Q9Y2T7 364 aaKnown RBP13.25□□□□□ -0.29
TPM1-209ENST00000558072 CEP83Q9Y592 693 aa13.25□□□□□ -0.29
TPM1-209ENST00000558072 H7C4K7 107 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 FOXN3O00409 490 aaPredicted RBP13.24□□□□□ -0.29
TPM1-209ENST00000558072 NRP1O14786 923 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 EPHB6O15197 1021 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms