RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 LPXNO60711 386 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 CXCL14O95715 111 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 SERPINC1P01008 464 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 CTSAP10619 480 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 P4HA1P13674 534 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 CAMK1Q14012 370 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 FKBP15Q5T1M5 1219 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 GBP6Q6ZN66 633 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 METTL23Q86XA0 190 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 VRTNQ9H8Y1 702 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 APOBEC3GQ9HC16 384 aaKnown RBP22.82■■□□□ 1.24
CASC4-204ENST00000557945 MRPL17Q9NRX2 175 aaKnown RBP22.82■■□□□ 1.24
CASC4-204ENST00000557945 CHST7Q9NS84 486 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 GCNT4Q9P109 453 aa22.82■■□□□ 1.24
CASC4-204ENST00000557945 LRRC10BA6NIK2 292 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 IRS1P35568 1242 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 DSG1Q02413 1049 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 LRMPQ12912 555 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 SMC1AQ14683 1233 aaKnown RBP22.81■■□□□ 1.24
CASC4-204ENST00000557945 VARS2Q5ST30 1063 aaKnown RBP22.81■■□□□ 1.24
CASC4-204ENST00000557945 WSCD1Q658N2 575 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 SCARA5Q6ZMJ2 495 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 GAS2L3Q86XJ1 694 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 EHBP1Q8NDI1 1231 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 INTS2Q9H0H0 1204 aaKnown RBP22.81■■□□□ 1.24
CASC4-204ENST00000557945 NGRNQ9NPE2 291 aaKnown RBP22.81■■□□□ 1.24
CASC4-204ENST00000557945 DSEQ9UL01 958 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 L1RE1Q9UN81 338 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 SSX2IPQ9Y2D8 614 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 PCDHGC5Q9Y5F6 944 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 CHD9Q3L8U1 2897 aa22.81■■□□□ 1.24
CASC4-204ENST00000557945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.8■■□□□ 1.24
CASC4-204ENST00000557945 TYMPP19971 482 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 YWHAHQ04917 246 aaPredicted RBP22.8■■□□□ 1.24
CASC4-204ENST00000557945 EXOC3L4Q17RC7 722 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 SOWAHAQ2M3V2 549 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 FILIP1LQ4L180 1135 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 KIAA0319Q5VV43 1072 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 PRSS55Q6UWB4 352 aaPredicted RBP22.8■■□□□ 1.24
CASC4-204ENST00000557945 APTXQ7Z2E3 356 aaKnown RBP22.8■■□□□ 1.24
CASC4-204ENST00000557945 PDCL2Q8N4E4 241 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 DEFB123Q8N688 67 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 TOP6BLQ8N6T0 577 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 MRPL38Q96DV4 380 aaKnown RBP22.8■■□□□ 1.24
CASC4-204ENST00000557945 NT5C1BQ96P26 610 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 RBSNQ9H1K0 784 aa22.8■■□□□ 1.24
CASC4-204ENST00000557945 GTPBP10A4D1E9 387 aaKnown RBP22.79■■□□□ 1.24
CASC4-204ENST00000557945 LGALS16A8MUM7 142 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 FSCN2O14926 492 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 IGFBP4P22692 258 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 FANCCQ00597 558 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 PTPN14Q15678 1187 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 OVOS1Q6IE37 1185 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 PDE12Q6L8Q7 609 aaKnown RBP22.79■■□□□ 1.24
CASC4-204ENST00000557945 ANKS3Q6ZW76 656 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 ADGRF2Q8IZF7 708 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 LMO3Q8TAP4 145 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 PIK3R5Q8WYR1 880 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 TATDN2Q93075 761 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 GAS2L1Q99501 681 aaPredicted RBP22.79■■□□□ 1.24
CASC4-204ENST00000557945 NIF3L1Q9GZT8 377 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 SMYD3Q9H7B4 428 aa22.79■■□□□ 1.24
CASC4-204ENST00000557945 COL4A4P53420 1690 aaPredicted RBP22.79■■□□□ 1.24
CASC4-204ENST00000557945 CYP11A1P05108 521 aa22.78■■□□□ 1.24
CASC4-204ENST00000557945 SLC9A1P19634 815 aa22.78■■□□□ 1.24
CASC4-204ENST00000557945 UBXN1Q04323 297 aa22.78■■□□□ 1.24
CASC4-204ENST00000557945 PSMD5Q16401 504 aa22.78■■□□□ 1.24
CASC4-204ENST00000557945 PDXDC1Q6P996 788 aa22.78■■□□□ 1.24
CASC4-204ENST00000557945 DPH6Q7L8W6 267 aa22.78■■□□□ 1.24
CASC4-204ENST00000557945 TMEM86AQ8N2M4 240 aa22.78■■□□□ 1.24
CASC4-204ENST00000557945 MRPL43Q8N983 215 aaKnown RBP22.78■■□□□ 1.24
CASC4-204ENST00000557945 LNX1Q8TBB1 728 aaPredicted RBP22.78■■□□□ 1.24
CASC4-204ENST00000557945 CHD7Q9P2D1 2997 aa22.78■■□□□ 1.24
CASC4-204ENST00000557945 HIDE1A8MVS5 230 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 H7C4K7 107 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 RPL17P18621 184 aaKnown RBP22.77■■□□□ 1.24
CASC4-204ENST00000557945 ASPAP45381 313 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 RAP1GAPP47736 663 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 CDH8P55286 799 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 CTXN3Q4LDR2 81 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 ZNF280DQ6N043 979 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 THEM5Q8N1Q8 247 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 SNX25Q9H3E2 840 aa22.77■■□□□ 1.24
CASC4-204ENST00000557945 C2orf71A6NGG8 1288 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 OAZ2O95190 189 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 WEE2P0C1S8 567 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 PON1P27169 355 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 ADGRE1Q14246 886 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 TRIM65Q6PJ69 517 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 PCMTD1Q96MG8 357 aaPredicted RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 MRPL45Q9BRJ2 306 aaKnown RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 EMILIN2Q9BXX0 1053 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 SDCBP2Q9H190 292 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.76■■□□□ 1.23
CASC4-204ENST00000557945 LMCD1Q9NZU5 365 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 VWA8A3KMH1 1905 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 MYO7AQ13402 2215 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 LILRB3O75022 631 aa22.76■■□□□ 1.23
CASC4-204ENST00000557945 WARSP23381 471 aaKnown RBP22.76■■□□□ 1.23
CASC4-204ENST00000557945 LHX1P48742 406 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms