RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 FSD2A1L4K1 749 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 C2CD2LO14523 706 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 C4BPAP04003 597 aaKnown RBP13.17□□□□□ -0.3
RCCD1-209ENST00000557750 URODP06132 367 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 ZNF165P49910 485 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 MYO1EQ12965 1108 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 USP41Q3LFD5 358 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 ZACNQ401N2 412 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 SV2CQ496J9 727 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 SCARA3Q6AZY7 606 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 LRRC52Q8N7C0 313 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 CXorf38Q8TB03 319 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 EDAQ92838 391 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 ZBP1Q9H171 429 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 TMEM8AQ9HCN3 771 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 SAMSN1Q9NSI8 373 aaKnown RBP13.17□□□□□ -0.3
RCCD1-209ENST00000557750 SPTLC1O15269 473 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 CST3P01034 146 aaPredicted RBP13.16□□□□□ -0.3
RCCD1-209ENST00000557750 CTSAP10619 480 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 GTF2H1P32780 548 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 GLUD2P49448 558 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 MXI1P50539 228 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 MARSP56192 900 aaKnown RBP13.16□□□□□ -0.3
RCCD1-209ENST00000557750 NCOA4Q13772 614 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 KRT39Q6A163 491 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 IRF2BP1Q8IU81 584 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 RNF168Q8IYW5 571 aaPredicted RBP13.16□□□□□ -0.3
RCCD1-209ENST00000557750 AOPEPQ8N6M6 819 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 SLC35C1Q96A29 364 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 HPDLQ96IR7 371 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 MSLNLQ96KJ4 702 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 TTPALQ9BTX7 342 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 NGRNQ9NPE2 291 aaKnown RBP13.16□□□□□ -0.3
RCCD1-209ENST00000557750 MRPL17Q9NRX2 175 aaKnown RBP13.16□□□□□ -0.3
RCCD1-209ENST00000557750 PCDHGC5Q9Y5F6 944 aa13.16□□□□□ -0.3
RCCD1-209ENST00000557750 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
RCCD1-209ENST00000557750 TDRD15B5MCY1 1934 aaKnown RBP13.16□□□□□ -0.3
RCCD1-209ENST00000557750 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
RCCD1-209ENST00000557750 KPNA7A9QM74 516 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 CXCL14O95715 111 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 EFEMP2O95967 443 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 PAX3P23760 479 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 TKTP29401 623 aaKnown RBP13.15□□□□□ -0.3
RCCD1-209ENST00000557750 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 MTIF2P46199 727 aaKnown RBP13.15□□□□□ -0.3
RCCD1-209ENST00000557750 AARSP49588 968 aaKnown RBP eCLIP13.15□□□□□ -0.3
RCCD1-209ENST00000557750 NDUFV1P49821 464 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 MYL6P60660 151 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
RCCD1-209ENST00000557750 RTP2Q5QGT7 225 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
RCCD1-209ENST00000557750 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 ADGRD2Q7Z7M1 963 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 TRIM59Q8IWR1 403 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 RIN2Q8WYP3 895 aaPredicted RBP13.15□□□□□ -0.3
RCCD1-209ENST00000557750 SENP8Q96LD8 212 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 BPIFA3Q9BQP9 254 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 CHST7Q9NS84 486 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 KIAA1671Q9BY89 1806 aa13.15□□□□□ -0.3
RCCD1-209ENST00000557750 BECN2A8MW95 431 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 KCNJ18B7U540 433 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 SYN3O14994 580 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 VNN1O95497 513 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 HLA-DRAP01903 254 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 ODC1P11926 461 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 MCCD1P59942 119 aaPredicted RBP13.15□□□□□ -0.31
RCCD1-209ENST00000557750 DSG1Q02413 1049 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 KCNJ12Q14500 433 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 PTPN14Q15678 1187 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 ZNF699Q32M78 642 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 CBWD6Q4V339 395 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 PDE12Q6L8Q7 609 aaKnown RBP13.15□□□□□ -0.31
RCCD1-209ENST00000557750 APPL2Q8NEU8 664 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 PRSS33Q8NF86 280 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 TAS1R2Q8TE23 839 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 IMPG2Q9BZV3 1241 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.31
RCCD1-209ENST00000557750 PCDHB8Q9UN66 801 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 TIMM13Q9Y5L4 95 aaPredicted RBP13.15□□□□□ -0.31
RCCD1-209ENST00000557750 SNX9Q9Y5X1 595 aa13.15□□□□□ -0.31
RCCD1-209ENST00000557750 USP34Q70CQ2 3546 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 TMEM221A6NGB7 291 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 SMTNL1A8MU46 457 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 HIDE1A8MVS5 230 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 M0QZQ0 153 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 M0R296 226 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 CYB561D2O14569 222 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 FSCN2O14926 492 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms