RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CCDC149Q6ZUS6 474 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 NKAPQ8N5F7 415 aaKnown RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 SLC35B2Q8TB61 432 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 ZNF668Q96K58 619 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 KLHL32Q96NJ5 620 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 RNPEPQ9H4A4 650 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 HESX1Q9UBX0 185 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 H3BUI4 141 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 ADAMTS3O15072 1205 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CDC14BO60729 498 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 PQBP1O60828 265 aaKnown RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CENPBP07199 599 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 SYN1P17600 705 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 GNAT2P19087 354 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 LRPAP1P30533 357 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 OS9Q13438 667 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 KHDC1LQ5JSQ8 128 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 SYCP2LQ5T4T6 812 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 ERICH6BQ5W0A0 696 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 ANKS6Q68DC2 871 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 TANGO2Q6ICL3 276 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 ATP11CQ8NB49 1132 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 LRGUKQ96M69 825 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CDK5RAP1Q96SZ6 601 aaKnown RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 MNTQ99583 582 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 DPYSL5Q9BPU6 564 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 REXO4Q9GZR2 422 aaKnown RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 SH2B3Q9UQQ2 575 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 TSC22D4Q9Y3Q8 395 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 USP19O94966 1318 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 GOLGA6L3A6NEY3 463 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 BTN3A1O00481 513 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 PLSCR1O15162 318 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 LPXNO60711 386 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 TJP3O95049 919 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ANXA2P07355 339 aaKnown RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SETSIPP0DME0 302 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 IL1R1P14778 569 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 MSX2P35548 267 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 MAN2A2P49641 1150 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ANXA11P50995 505 aaKnown RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 PTTG1IPP53801 180 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SOX8P57073 446 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 PIGFQ07326 219 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 RAB32Q13637 225 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ELAVL1Q15717 326 aaKnown RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 NPY5RQ15761 445 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 TMEM95Q3KNT9 176 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 AMOTQ4VCS5 1084 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 LCE3BQ5TA77 95 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ARL6IP4Q66PJ3 421 aaKnown RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ZNF783Q6ZMS7 281 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 FANCBQ8NB91 859 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SDCCAG3Q96C92 435 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 RIPOR3Q96MK2 946 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 CPPED1Q9BRF8 314 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 C1orf43Q9BWL3 253 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ZCWPW1Q9H0M4 648 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ZNF287Q9HBT7 754 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 GAR1Q9NY12 217 aaKnown RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 HS3ST4Q9Y661 456 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 E9PLN8 166 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 HLA-DOAP06340 250 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ITGA5P08648 1049 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SBK3P0C264 359 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ATXN1LP0C7T5 689 aaKnown RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SPATA31D3P0C874 917 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 MYL4P12829 197 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 KCNA2P16389 499 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 GABRB3P28472 473 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SLC7A1P30825 629 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 MAGEA10P43363 369 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 TOB1P50616 345 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SUMO3P55854 103 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 POLE2P56282 527 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 LOXL3P58215 753 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 HHEXQ03014 270 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 CREMQ03060 361 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 PTK2BQ14289 1009 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 CLCA4Q14CN2 919 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 KIAA0895LQ68EN5 471 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 IL31Q6EBC2 164 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 ZNF529Q6P280 563 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 GLB1LQ6UWU2 654 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SPATA31D4Q6ZUB0 917 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 USP37Q86T82 979 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 MYEOVQ96EZ4 313 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 VKORC1Q9BQB6 163 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 TRIM5Q9C035 493 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 C12orf65Q9H3J6 166 aaKnown RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 CEP72Q9P209 647 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 HSFX1Q9UBD0 423 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 FAM184BQ9ULE4 1060 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 FZD1Q9UP38 647 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 A0A0G2JLL6 359 aaPredicted RBP2.11□□□□□ -2.07
HIF1A-212ENST00000557538 STC2O76061 302 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 SRGNP10124 158 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 COPAP53621 1224 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 NFIXQ14938 502 aa2.11□□□□□ -2.07
HIF1A-212ENST00000557538 CDSNQ15517 529 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms