RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 TOB2Q14106 344 aaPredicted RBP4.93□□□□□ -1.62
CHD8-212ENST00000557329 CLUL1Q15846 466 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 QSER1Q2KHR3 1735 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 LHFPL2Q6ZUX7 228 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 PLXDC1Q8IUK5 500 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 PRPF38AQ8NAV1 312 aaKnown RBP4.93□□□□□ -1.62
CHD8-212ENST00000557329 C1orf162Q8NEQ5 155 aaPredicted RBP4.93□□□□□ -1.62
CHD8-212ENST00000557329 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.93□□□□□ -1.62
CHD8-212ENST00000557329 ZNF483Q8TF39 744 aaPredicted RBP4.93□□□□□ -1.62
CHD8-212ENST00000557329 COG1Q8WTW3 980 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 SLC25A43Q8WUT9 341 aaPredicted RBP4.93□□□□□ -1.62
CHD8-212ENST00000557329 HAS1Q92839 578 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 LENG9Q96B70 501 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 FAXDC2Q96IV6 333 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 SENP6Q9GZR1 1112 aaPredicted RBP4.93□□□□□ -1.62
CHD8-212ENST00000557329 VTA1Q9NP79 307 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 CEP72Q9P209 647 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 CENPJQ9HC77 1338 aaPredicted RBP4.93□□□□□ -1.62
CHD8-212ENST00000557329 ABCC6O95255 1503 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 KTN1Q86UP2 1357 aaKnown RBP4.92□□□□□ -1.62
CHD8-212ENST00000557329 SGTAO43765 313 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 CCND1P24385 295 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 ACVRL1P37023 503 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 RGS19P49795 217 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 HMGA2P52926 109 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 ANAPC15P60006 121 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 NOMO1Q15155 1222 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 OTUD7BQ6GQQ9 843 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 Q6ZRM9 215 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 PQLC1Q8N2U9 271 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 NLGN4YQ8NFZ3 816 aaPredicted RBP4.92□□□□□ -1.62
CHD8-212ENST00000557329 TFAP2CQ92754 450 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 HDAC10Q969S8 669 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 KCNH6Q9H252 994 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 PRDM12Q9H4Q4 367 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 MAN1C1Q9NR34 630 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 HOMER2Q9NSB8 354 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
CHD8-212ENST00000557329 FZD1Q9UP38 647 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 PXDNLA1KZ92 1463 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 EVC2Q86UK5 1308 aa4.92□□□□□ -1.62
CHD8-212ENST00000557329 WDR33Q9C0J8 1336 aaKnown RBP4.92□□□□□ -1.62
CHD8-212ENST00000557329 CNTNAP1P78357 1384 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 COL18A1P39060 1754 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 TMEM191CA6NGB0 347 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 RNASET2O00584 256 aaKnown RBP4.91□□□□□ -1.62
CHD8-212ENST00000557329 ADCY6O43306 1168 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 DDNO94850 711 aaPredicted RBP4.91□□□□□ -1.62
CHD8-212ENST00000557329 ZNF202O95125 648 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 HK1P19367 917 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 KCNA3P22001 575 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 ADSLP30566 484 aaPredicted RBP4.91□□□□□ -1.62
CHD8-212ENST00000557329 SREBF1P36956 1147 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 BLOC1S1P78537 153 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 LY6G5CQ5SRR4 150 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 PRAMEF14Q5SWL7 426 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 ATXN7L2Q5T6C5 722 aaPredicted RBP4.91□□□□□ -1.62
CHD8-212ENST00000557329 TRMT2AQ8IZ69 625 aaKnown RBP4.91□□□□□ -1.62
CHD8-212ENST00000557329 ZNF276Q8N554 614 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 MDM1Q8TC05 714 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 ZNF622Q969S3 477 aaKnown RBP eCLIP4.91□□□□□ -1.62
CHD8-212ENST00000557329 LSM14BQ9BX40 385 aaKnown RBP4.91□□□□□ -1.62
CHD8-212ENST00000557329 TMOD3Q9NYL9 352 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 TRHDEQ9UKU6 1024 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 PCDHGA2Q9Y5H1 932 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 COL24A1Q17RW2 1714 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 DOT1LQ8TEK3 1739 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 TTC21AQ8NDW8 1320 aa4.91□□□□□ -1.62
CHD8-212ENST00000557329 CICQ96RK0 1608 aaPredicted RBP4.9□□□□□ -1.62
CHD8-212ENST00000557329 NSD3Q9BZ95 1437 aa4.9□□□□□ -1.62
CHD8-212ENST00000557329 C5P01031 1676 aa4.9□□□□□ -1.62
CHD8-212ENST00000557329 hCG_2014768A0A024R1R8 64 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 NPHP1O15259 732 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 STC2O76061 302 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 POMCP01189 267 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 ITGB1P05556 798 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 MYBL2P10244 700 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 ALOX15P16050 662 aaPredicted RBP4.9□□□□□ -1.63
CHD8-212ENST00000557329 LAG3P18627 525 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 ATP5JP18859 108 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 GUCY1A2P33402 732 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 ADKP55263 362 aaKnown RBP4.9□□□□□ -1.63
CHD8-212ENST00000557329 EXOSC10Q01780 885 aaKnown RBP4.9□□□□□ -1.63
CHD8-212ENST00000557329 MTMR1Q13613 665 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 PNMA8AQ86V59 439 aaPredicted RBP4.9□□□□□ -1.63
CHD8-212ENST00000557329 CMIPQ8IY22 773 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 LILRA3Q8N6C8 439 aaPredicted RBP4.9□□□□□ -1.63
CHD8-212ENST00000557329 PIGBQ92521 554 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 IP6K1Q92551 441 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 HOXB13Q92826 284 aaPredicted RBP4.9□□□□□ -1.63
CHD8-212ENST00000557329 MTMR8Q96EF0 704 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 FUBP3Q96I24 572 aaKnown RBP eCLIP4.9□□□□□ -1.63
CHD8-212ENST00000557329 CEP89Q96ST8 783 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 ASAP1Q9ULH1 1129 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 SORCS3Q9UPU3 1222 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 DNM3Q9UQ16 869 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 SLIT3O75094 1523 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 NSD2O96028 1365 aa4.9□□□□□ -1.63
CHD8-212ENST00000557329 TNRC6CQ9HCJ0 1690 aaKnown RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 GABRDO14764 452 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms