RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 MAPK7Q13164 816 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 GPR17Q13304 367 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 CCINQ13939 588 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 NBR1Q14596 966 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 NOLC1Q14978 699 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNX6-209ENST00000557265 SF3A2Q15428 464 aaKnown RBP13.4□□□□□ -0.26
SNX6-209ENST00000557265 AASDHQ4L235 1098 aaPredicted RBP13.4□□□□□ -0.26
SNX6-209ENST00000557265 CENPPQ6IPU0 288 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 RINT1Q6NUQ1 792 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 C1orf186Q6ZWK4 172 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 GAREM2Q75VX8 874 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 HAUS6Q7Z4H7 955 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 DNAJB7Q7Z6W7 309 aaPredicted RBP13.4□□□□□ -0.26
SNX6-209ENST00000557265 USP37Q86T82 979 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 ATAD1Q8NBU5 361 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 NTPCRQ9BSD7 190 aaKnown RBP13.4□□□□□ -0.26
SNX6-209ENST00000557265 MKNK1Q9BUB5 465 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 ATXN3LQ9H3M9 355 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 C17orf75Q9HAS0 396 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 ANGPTL2Q9UKU9 493 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
SNX6-209ENST00000557265 CNOT1A5YKK6 2376 aaKnown RBP13.4□□□□□ -0.26
SNX6-209ENST00000557265 OR6C75A6NL08 312 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 PP2D1A8MPX8 630 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 CLDN3O15551 220 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 EXTL3O43909 919 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 SOAT2O75908 522 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 CXCL8P10145 99 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 LRPAP1P30533 357 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 TNK2Q07912 1038 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 GNL2Q13823 731 aaKnown RBP13.39□□□□□ -0.27
SNX6-209ENST00000557265 CCDC6Q16204 474 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 GPR158Q5T848 1215 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
SNX6-209ENST00000557265 KRT79Q5XKE5 535 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 SYNPOQ8N3V7 929 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 IGSF22Q8N9C0 903 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 C12orf50Q8NA57 414 aaPredicted RBP13.39□□□□□ -0.27
SNX6-209ENST00000557265 PSMG2Q969U7 264 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 KIF12Q96FN5 646 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 ARRDC1-AS1Q9H2J1 176 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 PLEKHA5Q9HAU0 1116 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 ASB3Q9Y575 518 aa13.39□□□□□ -0.27
SNX6-209ENST00000557265 CEP295Q9C0D2 2601 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 MTMR11A4FU01 709 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 PRAMEF12O95522 483 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 FGF19O95750 216 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 CLTAP09496 248 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 GABRR2P28476 465 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 CDC25AP30304 524 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX6-209ENST00000557265 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 PXNP49023 591 aaPredicted RBP13.38□□□□□ -0.27
SNX6-209ENST00000557265 GUCY2FP51841 1108 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 MCL1Q07820 350 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 ZBTB6Q15916 424 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 ARHGAP15Q53QZ3 475 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 OVOS1Q6IE37 1185 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 ZPBP2Q6X784 338 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 TTC9BQ8N6N2 239 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 TMEM161BQ8NDZ6 487 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 SPIRE2Q8WWL2 714 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 RAB34Q9BZG1 259 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 RXFP3Q9NSD7 469 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 OBP2AQ9NY56 170 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 NOL7Q9UMY1 257 aaKnown RBP13.38□□□□□ -0.27
SNX6-209ENST00000557265 COL4A2P08572 1712 aa13.38□□□□□ -0.27
SNX6-209ENST00000557265 TTC26A0AVF1 554 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 TM4SF5O14894 197 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 RPP40O75818 363 aaKnown RBP13.37□□□□□ -0.27
SNX6-209ENST00000557265 ZNF806P0C7X5 589 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 MAPTP10636 758 aaKnown RBP13.37□□□□□ -0.27
SNX6-209ENST00000557265 PLS3P13797 630 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 CYP3A5P20815 502 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 PMLP29590 882 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 AARSP49588 968 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX6-209ENST00000557265 LIMK1P53667 647 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 SMTNP53814 917 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
SNX6-209ENST00000557265 MYBPC2Q14324 1141 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 ARMCX5Q6P1M9 558 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 PKN3Q6P5Z2 889 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 CACNA2D4Q7Z3S7 1137 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 ITIH5Q86UX2 942 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 KBTBD6Q86V97 674 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 FBXO18Q8NFZ0 1043 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 BPIFB1Q8TDL5 484 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 GAB3Q8WWW8 586 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 LOXL4Q96JB6 756 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 TMEM209Q96SK2 561 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 HAPLN2Q9GZV7 340 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 SMG9Q9H0W8 520 aaKnown RBP13.37□□□□□ -0.27
SNX6-209ENST00000557265 TASP1Q9H6P5 420 aa13.37□□□□□ -0.27
SNX6-209ENST00000557265 KCNG1Q9UIX4 513 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms