RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SPTLC1O15269 473 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 ODC1P11926 461 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 GJA1P17302 382 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 PSMC3P17980 439 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
TUBB3-213ENST00000557262 POU5F1Q01860 360 aaKnown RBP17.22■□□□□ 0.35
TUBB3-213ENST00000557262 GRM2Q14416 872 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 TMEM132DQ14C87 1099 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 ZNF528Q3MIS6 628 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 LRRC3Q9BY71 257 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 CRISPLD1Q9H336 500 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 TRPV4Q9HBA0 871 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 ZNF334Q9HCZ1 680 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-213ENST00000557262 TRPV5Q9NQA5 729 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 STK17AQ9UEE5 414 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 AGO2Q9UKV8 859 aaKnown RBP17.22■□□□□ 0.35
TUBB3-213ENST00000557262 SLC27A5Q9Y2P5 690 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 SRPRBQ9Y5M8 271 aaKnown RBP17.22■□□□□ 0.35
TUBB3-213ENST00000557262 CACNA1IQ9P0X4 2223 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 SPTBN4Q9H254 2564 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 MAN2B1O00754 1011 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 NFICP08651 508 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 VIPR2P41587 438 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 RPS9P46781 194 aaKnown RBP17.21■□□□□ 0.35
TUBB3-213ENST00000557262 FZD5Q13467 585 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 POSTNQ15063 836 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 TEAD2Q15562 447 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 RRAGBQ5VZM2 374 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 VITQ6UXI7 678 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 ATAD1Q8NBU5 361 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 SHKBP1Q8TBC3 707 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 ZSCAN18Q8TBC5 510 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-213ENST00000557262 DEPDC1BQ8WUY9 529 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 E2F7Q96AV8 911 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 HVCN1Q96D96 273 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 HSFX1Q9UBD0 423 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 FBXO2Q9UK22 296 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-213ENST00000557262 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 ASB3Q9Y575 518 aa17.21■□□□□ 0.35
TUBB3-213ENST00000557262 COL4A3Q01955 1670 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 MIA3Q5JRA6 1907 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 MTMR11A4FU01 709 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 SHISA7A6NL88 538 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 TISP43B9A030 160 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 CYP11A1P05108 521 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 GDI1P31150 447 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 CSTF1Q05048 431 aaKnown RBP17.2■□□□□ 0.34
TUBB3-213ENST00000557262 SV2BQ7L1I2 683 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 DNAJB7Q7Z6W7 309 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-213ENST00000557262 SFR1Q86XK3 245 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 MFSD6LQ8IWD5 586 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 TMEM209Q96SK2 561 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 DNAJC25Q9H1X3 360 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 DPP3Q9NY33 737 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 SEL1LQ9UBV2 794 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 DSEQ9UL01 958 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 GVINP1Q7Z2Y8 2422 aa17.2■□□□□ 0.34
TUBB3-213ENST00000557262 A0A1W2PRU2 124 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 ZNF263O14978 683 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 GAP43P17677 238 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 SYT1P21579 422 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 TXLNAP40222 546 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 TUFMP49411 452 aaKnown RBP17.19■□□□□ 0.34
TUBB3-213ENST00000557262 CRELD2Q6UXH1 353 aaPredicted RBP17.19■□□□□ 0.34
TUBB3-213ENST00000557262 METTL23Q86XA0 190 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 TMC8Q8IU68 726 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 THEM5Q8N1Q8 247 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 POMGNT1Q8WZA1 660 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 CLIC6Q96NY7 704 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 STRA6Q9BX79 667 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 SLITRK6Q9H5Y7 841 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
TUBB3-213ENST00000557262 EXOC7Q9UPT5 735 aa17.19■□□□□ 0.34
TUBB3-213ENST00000557262 EP300Q09472 2414 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-213ENST00000557262 MYMKA6NI61 221 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 HEPACAM2A8MVW5 462 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 CYB561D2O14569 222 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
TUBB3-213ENST00000557262 PPP1R37O75864 691 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 FGF19O95750 216 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 ADSSP30520 456 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 TAF6P49848 677 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 FOXK2Q01167 660 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 CEBPZQ03701 1054 aaKnown RBP17.18■□□□□ 0.34
TUBB3-213ENST00000557262 RESTQ13127 1097 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 FAM173BQ6P4H8 233 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 ITIH5Q86UX2 942 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 NT5DC4Q86YG4 428 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 SUMF1Q8NBK3 374 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 OR10T2Q8NGX3 314 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 ATRIPQ8WXE1 791 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 FAM3CQ92520 227 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 PSMG2Q969U7 264 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 DNAJC19Q96DA6 116 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 ACCSQ96QU6 501 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 ZCWPW1Q9H0M4 648 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 IKZF4Q9H2S9 585 aa17.18■□□□□ 0.34
TUBB3-213ENST00000557262 NDRG2Q9UN36 371 aaKnown RBP17.18■□□□□ 0.34
TUBB3-213ENST00000557262 FRYLO94915 3013 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms