RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ARHGEF37A1IGU5 675 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 ARHGEF35A5YM69 484 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 CCL16O15467 120 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 LAMTOR5O43504 91 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 KINO60870 393 aaKnown RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 MED24O75448 989 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 B3GAT3O94766 335 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 GLULP15104 373 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 RPS9P46781 194 aaKnown RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 TRAPPC10P48553 1259 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 SRSF11Q05519 484 aaKnown RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 SNW1Q13573 536 aaKnown RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 PDIA5Q14554 519 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 UPP1Q16831 310 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 PABPC1LQ4VXU2 614 aaKnown RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 ZBTB41Q5SVQ8 909 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 ALKAL1Q6UXT8 129 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 MAEAQ7L5Y9 396 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 NOSTRINQ8IVI9 506 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 MAML2Q8IZL2 1156 aaPredicted RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 NECAB1Q8N987 351 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 SUMF1Q8NBK3 374 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 ZNF461Q8TAF7 563 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 ITFG1Q8TB96 612 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 SLC7A14Q8TBB6 771 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 HASPINQ8TF76 798 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 BSNDQ8WZ55 320 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 NELL1Q92832 810 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 IER2Q9BTL4 223 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 FAM126AQ9BYI3 521 aaPredicted RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 NUCKS1Q9H1E3 243 aaKnown RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 FOXP1Q9H334 677 aaPredicted RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 TOPORSQ9NS56 1045 aaPredicted RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 SLC38A7Q9NVC3 462 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 DNMT3BQ9UBC3 853 aaKnown RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 KCNG1Q9UIX4 513 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
VRK1-206ENST00000557222 MRPS17Q9Y2R5 130 aaKnown RBP9.51□□□□□ -0.89
VRK1-206ENST00000557222 SPTBN2O15020 2390 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 NOTCH4Q99466 2003 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 A0A1B0GTH6 734 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 FAM170BA6NMN3 283 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 H7C4K7 107 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 K7ERI5 159 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ZNF197O14709 1029 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 SYN3O14994 580 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ADAM12O43184 909 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ABLIM3O94929 683 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 OR52Z1P0C646 297 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 PTPN2P17706 415 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 RPL9P32969 192 aaKnown RBP9.5□□□□□ -0.89
VRK1-206ENST00000557222 MCM7P33993 719 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 YARSP54577 528 aaKnown RBP9.5□□□□□ -0.89
VRK1-206ENST00000557222 NTHL1P78549 312 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 EML3Q32P44 896 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 NT5DC1Q5TFE4 455 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ATF7IP2Q5U623 682 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 EEF1DP3Q658K8 133 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 TPGS2Q68CL5 300 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 SLC8B1Q6J4K2 584 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 CD300LGQ6UXG3 332 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ZNF852Q6ZMS4 543 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 DGLUCYQ7Z3D6 616 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 SVOPQ8N4V2 548 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ZBTB44Q8NCP5 570 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 DNASE1L2Q92874 299 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ELSPBP1Q96BH3 223 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 FOXQ1Q9C009 403 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 C17orf75Q9HAS0 396 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 GPAMQ9HCL2 828 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 LTB4R2Q9NPC1 389 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 TRPV5Q9NQA5 729 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ZSCAN32Q9NX65 697 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 DLL3Q9NYJ7 618 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 CACNG4Q9UBN1 327 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 POLIQ9UNA4 740 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 GDAQ9Y2T3 454 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 MRPS23Q9Y3D9 190 aaKnown RBP9.5□□□□□ -0.89
VRK1-206ENST00000557222 RBM19Q9Y4C8 960 aaKnown RBP9.5□□□□□ -0.89
VRK1-206ENST00000557222 PCDHGA11Q9Y5H2 935 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.5□□□□□ -0.89
VRK1-206ENST00000557222 CDY1Q9Y6F8 540 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 ACACBO00763 2458 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 VWA8A3KMH1 1905 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 MYH15Q9Y2K3 1946 aa9.5□□□□□ -0.89
VRK1-206ENST00000557222 MIA3Q5JRA6 1907 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 A0A087WWV3 80 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 SMIM28A0A1B0GU29 152 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 TMEM229AB2RXF0 380 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 MAN2B1O00754 1011 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 TBC1D4O60343 1298 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 LILRB5O75023 590 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 THBS1P07996 1170 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 RHOP08100 348 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 ATF2P15336 505 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 KCNE1P15382 129 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 ELF1P32519 619 aa9.49□□□□□ -0.89
VRK1-206ENST00000557222 CLCNKBP51801 687 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms