RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 HNRNPA1P09651 372 aaKnown RBP eCLIP24.65■■□□□ 1.54
TDP1-216ENST00000556867 DLATP10515 647 aaKnown RBP24.65■■□□□ 1.54
TDP1-216ENST00000556867 RBP5P82980 135 aa24.65■■□□□ 1.54
TDP1-216ENST00000556867 NFIL3Q16649 462 aa24.65■■□□□ 1.54
TDP1-216ENST00000556867 TPGS2Q68CL5 300 aa24.65■■□□□ 1.54
TDP1-216ENST00000556867 OVOS1Q6IE37 1185 aa24.65■■□□□ 1.54
TDP1-216ENST00000556867 SMG7Q92540 1137 aaKnown RBP24.65■■□□□ 1.54
TDP1-216ENST00000556867 PRKD2Q9BZL6 878 aa24.65■■□□□ 1.54
TDP1-216ENST00000556867 GZF1Q9H116 711 aaPredicted RBP24.65■■□□□ 1.54
TDP1-216ENST00000556867 CYB561D2O14569 222 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 POU2F2P09086 479 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 ARPP19P56211 112 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 UVSSAQ2YD98 709 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 COBLL1Q53SF7 1204 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 PPM1LQ5SGD2 360 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 ZNF658Q5TYW1 1059 aaPredicted RBP24.64■■□□□ 1.54
TDP1-216ENST00000556867 CCDC149Q6ZUS6 474 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 SMYD4Q8IYR2 804 aaPredicted RBP24.64■■□□□ 1.54
TDP1-216ENST00000556867 SLC7A14Q8TBB6 771 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 ERCC4Q92889 916 aaPredicted RBP24.64■■□□□ 1.54
TDP1-216ENST00000556867 CCDC127Q96BQ5 260 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 RPGRIP1Q96KN7 1286 aa24.64■■□□□ 1.54
TDP1-216ENST00000556867 GTPBP4Q9BZE4 634 aaKnown RBP24.64■■□□□ 1.54
TDP1-216ENST00000556867 KRT19P08727 400 aa24.63■■□□□ 1.53
TDP1-216ENST00000556867 ATF2P15336 505 aa24.63■■□□□ 1.53
TDP1-216ENST00000556867 TNNI1P19237 187 aa24.63■■□□□ 1.53
TDP1-216ENST00000556867 ZCWPW2Q504Y3 356 aa24.63■■□□□ 1.53
TDP1-216ENST00000556867 SCARA3Q6AZY7 606 aa24.63■■□□□ 1.53
TDP1-216ENST00000556867 CLEC17AQ6ZS10 378 aa24.63■■□□□ 1.53
TDP1-216ENST00000556867 MAFFQ9ULX9 164 aa24.63■■□□□ 1.53
TDP1-216ENST00000556867 NR2E1Q9Y466 385 aa24.63■■□□□ 1.53
TDP1-216ENST00000556867 CPB1P15086 417 aa24.62■■□□□ 1.53
TDP1-216ENST00000556867 CASP4P49662 377 aa24.62■■□□□ 1.53
TDP1-216ENST00000556867 BFSP1Q12934 665 aa24.62■■□□□ 1.53
TDP1-216ENST00000556867 TRAPPC11Q7Z392 1133 aa24.62■■□□□ 1.53
TDP1-216ENST00000556867 PLEKHO2Q8TD55 490 aa24.62■■□□□ 1.53
TDP1-216ENST00000556867 WDR6Q9NNW5 1121 aaKnown RBP24.62■■□□□ 1.53
TDP1-216ENST00000556867 GDAP2Q9NXN4 497 aa24.62■■□□□ 1.53
TDP1-216ENST00000556867 AFF4Q9UHB7 1163 aaKnown RBP24.62■■□□□ 1.53
TDP1-216ENST00000556867 USTQ9Y2C2 406 aa24.62■■□□□ 1.53
TDP1-216ENST00000556867 DOCK6Q96HP0 2047 aa24.62■■□□□ 1.53
TDP1-216ENST00000556867 NR2F2P24468 414 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 ELF1P32519 619 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 PRCPP42785 496 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 CLDN10P78369 228 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 WSCD1Q658N2 575 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 METTL23Q86XA0 190 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 TCEAL8Q8IYN2 117 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 PARD3BQ8TEW8 1205 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 PIDD1Q9HB75 910 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 FRMD4BQ9Y2L6 1034 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 R3HCC1Q9Y3T6 440 aaKnown RBP24.61■■□□□ 1.53
TDP1-216ENST00000556867 CLUHO75153 1309 aa24.61■■□□□ 1.53
TDP1-216ENST00000556867 PRRG1O14668 218 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 MAPK13O15264 365 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 XYLBO75191 536 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 RPL13P26373 211 aaKnown RBP24.6■■□□□ 1.53
TDP1-216ENST00000556867 MYO1EQ12965 1108 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 EDRF1Q3B7T1 1238 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 CEP135Q66GS9 1140 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 ZNF516Q92618 1163 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 KHSRPQ92945 711 aaKnown RBP eCLIP24.6■■□□□ 1.53
TDP1-216ENST00000556867 IPO9Q96P70 1041 aaKnown RBP24.6■■□□□ 1.53
TDP1-216ENST00000556867 RTP3Q9BQQ7 232 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 TSHZ2Q9NRE2 1034 aa24.6■■□□□ 1.53
TDP1-216ENST00000556867 DOCK8Q8NF50 2099 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 LRRIQ3A6PVS8 624 aaPredicted RBP24.59■■□□□ 1.53
TDP1-216ENST00000556867 C2CD4DB7Z1M9 353 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 CCL16O15467 120 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 SEC24AO95486 1093 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 OR4Q2P0C623 313 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 SP100P23497 879 aaPredicted RBP24.59■■□□□ 1.53
TDP1-216ENST00000556867 AP3M2P53677 418 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 ADCY1Q08828 1119 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 GPR17Q13304 367 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 RNF19BQ6ZMZ0 732 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 RNF135Q8IUD6 432 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 PDCL2Q8N4E4 241 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 TDRD5Q8NAT2 981 aaKnown RBP24.59■■□□□ 1.53
TDP1-216ENST00000556867 OR10T2Q8NGX3 314 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 SPATA18Q8TC71 538 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 TMC2Q8TDI7 906 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 HPDLQ96IR7 371 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 CYP4F11Q9HBI6 524 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 MAN1B1Q9UKM7 699 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 L1RE1Q9UN81 338 aa24.59■■□□□ 1.53
TDP1-216ENST00000556867 HUS1O60921 280 aa24.58■■□□□ 1.53
TDP1-216ENST00000556867 OTOP3Q7RTS5 596 aa24.58■■□□□ 1.53
TDP1-216ENST00000556867 THEM5Q8N1Q8 247 aa24.58■■□□□ 1.53
TDP1-216ENST00000556867 TMEM86AQ8N2M4 240 aa24.58■■□□□ 1.53
TDP1-216ENST00000556867 TOP6BLQ8N6T0 577 aa24.58■■□□□ 1.53
TDP1-216ENST00000556867 TMEM209Q96SK2 561 aa24.58■■□□□ 1.53
TDP1-216ENST00000556867 INSL5Q9Y5Q6 135 aa24.58■■□□□ 1.53
TDP1-216ENST00000556867 SNX9Q9Y5X1 595 aa24.58■■□□□ 1.53
TDP1-216ENST00000556867 AKAP3O75969 853 aa24.57■■□□□ 1.52
TDP1-216ENST00000556867 VNN2O95498 520 aa24.57■■□□□ 1.52
TDP1-216ENST00000556867 CENPPQ6IPU0 288 aa24.57■■□□□ 1.52
TDP1-216ENST00000556867 LIMS2Q7Z4I7 341 aa24.57■■□□□ 1.52
TDP1-216ENST00000556867 ZDHHC14Q8IZN3 488 aa24.57■■□□□ 1.52
TDP1-216ENST00000556867 ADSSL1Q8N142 457 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms