RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 FAM200AQ8TCP9 573 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 CSGALNACT1Q8TDX6 532 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 SECISBP2LQ93073 1101 aaKnown RBP16.06■□□□□ 0.16
CHD8-211ENST00000556833 LPIN3Q9BQK8 851 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 NTPCRQ9BSD7 190 aaKnown RBP16.06■□□□□ 0.16
CHD8-211ENST00000556833 SMG9Q9H0W8 520 aaKnown RBP16.06■□□□□ 0.16
CHD8-211ENST00000556833 IKZF4Q9H2S9 585 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 RPF1Q9H9Y2 349 aaKnown RBP16.06■□□□□ 0.16
CHD8-211ENST00000556833 DLL3Q9NYJ7 618 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 UBQLN1Q9UMX0 589 aaKnown RBP16.06■□□□□ 0.16
CHD8-211ENST00000556833 SDK1Q7Z5N4 2213 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 DCDC2BA2VCK2 349 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 MTMR11A4FU01 709 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 H3BQV1 296 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 EIF5BO60841 1220 aaKnown RBP16.05■□□□□ 0.16
CHD8-211ENST00000556833 FAM13AO94988 1023 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 KRT18P05783 430 aaKnown RBP16.05■□□□□ 0.16
CHD8-211ENST00000556833 GJB2P29033 226 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 LRPAP1P30533 357 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 ALDH1A3P47895 512 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 EPHA5P54756 1037 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 CYP4F8P98187 520 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 GAS6Q14393 721 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 MCM6Q14566 821 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 MFSD6LQ8IWD5 586 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 STKLD1Q8NE28 680 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 RASSF8Q8NHQ8 419 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 DEPDC1BQ8WUY9 529 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 SEPT5Q99719 369 aaPredicted RBP16.05■□□□□ 0.16
CHD8-211ENST00000556833 MSTO1Q9BUK6 570 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 LRRC3Q9BY71 257 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 ATXN3LQ9H3M9 355 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 C2orf42Q9NWW7 574 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 LARSQ9P2J5 1176 aaKnown RBP16.05■□□□□ 0.16
CHD8-211ENST00000556833 GMEB2Q9UKD1 530 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 CDV3Q9UKY7 258 aaKnown RBP16.05■□□□□ 0.16
CHD8-211ENST00000556833 TBX20Q9UMR3 447 aa16.05■□□□□ 0.16
CHD8-211ENST00000556833 CHURC1-FNTBB4DL54 471 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 MICAL2O94851 1124 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 OAZ2O95190 189 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 CD2BP2O95400 341 aaKnown RBP16.04■□□□□ 0.16
CHD8-211ENST00000556833 TDGF1P13385 188 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 KCNA4P22459 653 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 GABRR2P28476 465 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 NMT1P30419 496 aaKnown RBP16.04■□□□□ 0.16
CHD8-211ENST00000556833 FNTBP49356 437 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 ACOT2P49753 483 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 ATXN1P54253 815 aaKnown RBP16.04■□□□□ 0.16
CHD8-211ENST00000556833 GRIN1Q05586 938 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 ZBTB6Q15916 424 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 SLC39A12Q504Y0 691 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 WDR44Q5JSH3 913 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 GPR158Q5T848 1215 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 SLC39A4Q6P5W5 647 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 TXNDC11Q6PKC3 985 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 GAREM2Q75VX8 874 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 ARID3BQ8IVW6 561 aaPredicted RBP16.04■□□□□ 0.16
CHD8-211ENST00000556833 BEST2Q8NFU1 509 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 OR10T2Q8NGX3 314 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 NELL1Q92832 810 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 SENP8Q96LD8 212 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 LRRC3BQ96PB8 259 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 PLEKHA5Q9HAU0 1116 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 GTSE1Q9NYZ3 720 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 RAB23Q9ULC3 237 aa16.04■□□□□ 0.16
CHD8-211ENST00000556833 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.04■□□□□ 0.16
CHD8-211ENST00000556833 OR6C75A6NL08 312 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 ANKRD63C9JTQ0 380 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 ARNTLO00327 626 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 DPYSL4O14531 572 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 OGTO15294 1046 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 FAM189A1O60320 539 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 PRAMEF12O95522 483 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 CHRNB1P11230 501 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 ODC1P11926 461 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 PLCG1P19174 1290 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHD8-211ENST00000556833 CCR3P51677 355 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 LILRA4P59901 499 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 TNK2Q07912 1038 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 PLD1Q13393 1074 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 KARSQ15046 597 aaKnown RBP16.03■□□□□ 0.16
CHD8-211ENST00000556833 PON2Q15165 354 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 MGAT5BQ3V5L5 792 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 C8orf34Q49A92 452 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 ZC2HC1CQ53FD0 456 aaPredicted RBP16.03■□□□□ 0.16
CHD8-211ENST00000556833 CENPPQ6IPU0 288 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 DNAJB7Q7Z6W7 309 aaPredicted RBP16.03■□□□□ 0.16
CHD8-211ENST00000556833 LEMD2Q8NC56 503 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 GIPC2Q8TF65 315 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 OBSL1O75147 1896 aa16.03■□□□□ 0.16
CHD8-211ENST00000556833 TPRP12270 2363 aaKnown RBP16.02■□□□□ 0.16
CHD8-211ENST00000556833 DENND4CQ5VZ89 1909 aa16.02■□□□□ 0.16
CHD8-211ENST00000556833 XPOTO43592 962 aaKnown RBP16.02■□□□□ 0.16
CHD8-211ENST00000556833 CXCL12P48061 93 aa16.02■□□□□ 0.16
CHD8-211ENST00000556833 GPR17Q13304 367 aa16.02■□□□□ 0.16
CHD8-211ENST00000556833 TMEM132DQ14C87 1099 aa16.02■□□□□ 0.16
CHD8-211ENST00000556833 C9orf57Q5W0N0 161 aa16.02■□□□□ 0.16
CHD8-211ENST00000556833 ARMCX5Q6P1M9 558 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms