RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 ZNF677Q86XU0 584 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 ATXN2LQ8WWM7 1075 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 MTFR1LQ9H019 292 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 FNDC3AQ9Y2H6 1198 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 SUGT1Q9Y2Z0 365 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 GOLGA8CPA6NN73 597 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 RNF225M0QZC1 329 aaPredicted RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 GZMAP12544 262 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 PTPN4P29074 926 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 PMLP29590 882 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 PBX1P40424 430 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 SERPINB9P50453 376 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 ATXN3P54252 364 aaPredicted RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 PPP4CP60510 307 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 ZCWPW2Q504Y3 356 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 HABP4Q5JVS0 413 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 GALNT4Q8N4A0 578 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 MREGQ8N565 214 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 SCG3Q8WXD2 468 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 GFM2Q969S9 779 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 EME1Q96AY2 570 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 ACSF2Q96CM8 615 aaPredicted RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 THAP11Q96EK4 314 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 ITSN1Q15811 1721 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 GPR75-ASB3A0A0A6YYF3 556 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 SMAPO00193 183 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 EPHB6O15197 1021 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 DGAT1O75907 488 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 PDGFRAP16234 1089 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 ZFXP17010 805 aaPredicted RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 PAPOLAP51003 745 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 WDR72Q3MJ13 1102 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 FASTKD1Q53R41 847 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 PLA2G4FQ68DD2 849 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 SNRNP48Q6IEG0 339 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 PID1Q7Z2X4 250 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 GIPC2Q8TF65 315 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 ABCF3Q9NUQ8 709 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 GGA2Q9UJY4 613 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUMB-223ENST00000556772 KIDINS220Q9ULH0 1771 aa8.48□□□□□ -1.05
NUMB-223ENST00000556772 ARHGEF28Q8N1W1 1705 aaKnown RBP8.48□□□□□ -1.05
NUMB-223ENST00000556772 MROH1Q8NDA8 1641 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 GTPBP10A4D1E9 387 aaKnown RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 IQCA1LA6NCM1 817 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 DDX3XO00571 662 aaKnown RBP eCLIP8.47□□□□□ -1.05
NUMB-223ENST00000556772 KIAA0391O15091 583 aaKnown RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 SUPT3HO75486 399 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SEC24DO94855 1032 aaPredicted RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 MYCP01106 439 aaPredicted RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 CYP11B1P15538 503 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 NFIXQ14938 502 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SWT1Q5T5J6 900 aaKnown RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 BBS5Q8N3I7 341 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 FAM71DQ8N9W8 422 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SPDYE1Q8NFV5 336 aaPredicted RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 TBC1D16Q8TBP0 767 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SKA2Q8WVK7 121 aaPredicted RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 TMA16Q96EY4 203 aaKnown RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 MASTLQ96GX5 879 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 FAM167AQ96KS9 214 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 WDR35Q9P2L0 1181 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 ATP9BO43861 1147 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 MYL2P10916 166 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 CIITAP33076 1130 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 PRAMEP78395 509 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 BTKQ06187 659 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 CYLC2Q14093 348 aaPredicted RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 FAM47CQ5HY64 1035 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 MIIPQ5JXC2 388 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 C11orf63Q6NUN7 778 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 C4orf50Q6ZRC1 276 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 PGBD4Q96DM1 585 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 CLMNQ96JQ2 1002 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 ANKRD27Q96NW4 1050 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SHCBP1LQ9BZQ2 653 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 BLOC1S4Q9NUP1 217 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 PAK5Q9P286 719 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SPATA31A5Q5VU36 1347 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SPATA31A7Q8IWB4 1347 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 PPLO60437 1756 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SRRM3A6NNA2 597 aaPredicted RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 PSTPIP1O43586 416 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 ECE2O60344 883 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 ATP6V1B1P15313 513 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 MROH9Q5TGP6 573 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 C1orf131Q8NDD1 294 aaKnown RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 PRCCQ92733 491 aaPredicted RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 TMEM237Q96Q45 408 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 NUDT12Q9BQG2 462 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 GRID1Q9ULK0 1009 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SNX5Q9Y5X3 404 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 E2F6O75461 281 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 CALB2P22676 271 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 SNRPFP62306 86 aaKnown RBP8.47□□□□□ -1.05
NUMB-223ENST00000556772 TNFAIP2Q03169 654 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 MAPRE2Q15555 327 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 CDC42EP5Q6NZY7 148 aa8.47□□□□□ -1.05
NUMB-223ENST00000556772 RNF135Q8IUD6 432 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms