RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 PSMC2P35998 433 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 CLDN10P78369 228 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 CLUL1Q15846 466 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 UVSSAQ2YD98 709 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 LIN9Q5TKA1 542 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 CEP135Q66GS9 1140 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 TPGS2Q68CL5 300 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 OVOS1Q6IE37 1185 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 CCDC149Q6ZUS6 474 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 INTS8Q75QN2 995 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 PALB2Q86YC2 1186 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 ADSSL1Q8N142 457 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 KREMEN2Q8NCW0 462 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 CXorf38Q8TB03 319 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 PARD3BQ8TEW8 1205 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 CCDC127Q96BQ5 260 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 DHTKD1Q96HY7 919 aaPredicted RBP11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 GDAP2Q9NXN4 497 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 AGAP1Q9UPQ3 857 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 MAPK8IP1Q9UQF2 711 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 CDY1Q9Y6F8 540 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 SCN1AP35498 2009 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
MTHFD1-214ENST00000556771 PTPRJQ12913 1337 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 CYB561D2O14569 222 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 IKBKBO14920 756 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 CETN3O15182 167 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 SPTLC1O15269 473 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 HUS1O60921 280 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 ZMYND10O75800 440 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 POU2F2P09086 479 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 KRT13P13646 458 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 IL9P15248 144 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 ATICP31939 592 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 FKBP3Q00688 224 aaKnown RBP11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 ROR1Q01973 937 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 SMARCB1Q12824 385 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 BFSP1Q12934 665 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 ADAM9Q13443 819 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 MORC3Q14149 939 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 CBX2Q14781 532 aaPredicted RBP11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 ATAT1Q5SQI0 421 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 RARS2Q5T160 578 aaKnown RBP11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 DPH6Q7L8W6 267 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 TRAPPC11Q7Z392 1133 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 GPR149Q86SP6 731 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 GLYCTKQ8IVS8 523 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 ADHFE1Q8IWW8 467 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 SMYD4Q8IYR2 804 aaPredicted RBP11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 THEM5Q8N1Q8 247 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 TMEM86AQ8N2M4 240 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 OR5B17Q8NGF7 314 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 ZNF461Q8TAF7 563 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 ERCC4Q92889 916 aaPredicted RBP11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 PHF7Q9BWX1 381 aaPredicted RBP11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 CLSTN2Q9H4D0 955 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 LMBRD1Q9NUN5 540 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 KIAA1468Q9P260 1216 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 SIX4Q9UIU6 781 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 FBXL5Q9UKA1 691 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 NCOR1O75376 2440 aa11.37□□□□□ -0.59
MTHFD1-214ENST00000556771 CUL9Q8IWT3 2517 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 BICDL2A1A5D9 508 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 LRRIQ3A6PVS8 624 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 SLC16A3O15427 465 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 ADAM12O43184 909 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 PHACTR2O75167 634 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 XYLBO75191 536 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 AKAP3O75969 853 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 ABLIM3O94929 683 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 FAM163BP0C2L3 166 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 EPB41P11171 864 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 CPB1P15086 417 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 ATF2P15336 505 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 CCNE1P24864 410 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 ELF1P32519 619 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 CASP4P49662 377 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 VAMP7P51809 220 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 MCCD1P59942 119 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 TRPC3Q13507 836 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 LMBRD2Q68DH5 695 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 RSPO2Q6UXX9 243 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 ZC3H3Q8IXZ2 948 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 FAM186BQ8IYM0 893 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 TMEM130Q8N3G9 435 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 TOP6BLQ8N6T0 577 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 SYAP1Q96A49 352 aaPredicted RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 BORCS6Q96GS4 357 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 HPDLQ96IR7 371 aa11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 AFF4Q9UHB7 1163 aaKnown RBP11.36□□□□□ -0.59
MTHFD1-214ENST00000556771 TSC2P49815 1807 aa11.35□□□□□ -0.59
MTHFD1-214ENST00000556771 CCDC195A0A1B0GUA6 201 aa11.35□□□□□ -0.59
MTHFD1-214ENST00000556771 WDR27A2RRH5 827 aa11.35□□□□□ -0.59
MTHFD1-214ENST00000556771 STX10O60499 249 aa11.35□□□□□ -0.59
MTHFD1-214ENST00000556771 C8AP07357 584 aa11.35□□□□□ -0.59
MTHFD1-214ENST00000556771 SPATA31D3P0C874 917 aa11.35□□□□□ -0.59
MTHFD1-214ENST00000556771 GTF2H1P32780 548 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms