RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 RPL7AP62424 266 aaKnown RBP10.77□□□□□ -0.69
TMEM260-211ENST00000556648 CLUL1Q15846 466 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 ZSCAN26Q16670 478 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 SGSM1Q2NKQ1 1148 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 ZNF484Q5JVG2 852 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 CYP4A22Q5TCH4 519 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 JADE1Q6IE81 842 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 EXOC8Q8IYI6 725 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 C1orf127Q8N9H9 656 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 C12orf50Q8NA57 414 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-211ENST00000556648 HEMGNQ9BXL5 484 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 SMYD3Q9H7B4 428 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 RPF1Q9H9Y2 349 aaKnown RBP10.77□□□□□ -0.69
TMEM260-211ENST00000556648 RASAL2Q9UJF2 1139 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 GRIN2DO15399 1336 aa10.77□□□□□ -0.69
TMEM260-211ENST00000556648 TCRBV5S1A1TA0A578 114 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 TLR3O15455 904 aaKnown RBP10.76□□□□□ -0.69
TMEM260-211ENST00000556648 STAG3L1P0CL83 205 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 MMP8P22894 467 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 SSR1P43307 286 aaKnown RBP10.76□□□□□ -0.69
TMEM260-211ENST00000556648 PHKA2P46019 1235 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 CCNA1P78396 465 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 OGDHQ02218 1023 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 C1QBPQ07021 282 aaKnown RBP10.76□□□□□ -0.69
TMEM260-211ENST00000556648 PDCLQ13371 301 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 ATP13A4Q4VNC1 1196 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 LRIG3Q6UXM1 1119 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 GPR142Q7Z601 462 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 CCDC105Q8IYK2 499 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 ANKRD36BP1Q96IX9 119 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 ATP6V1G3Q96LB4 118 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 TWNKQ96RR1 684 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 PTPN18Q99952 460 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 CXCL16Q9H2A7 254 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 CENPHQ9H3R5 247 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 PRMT7Q9NVM4 692 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-211ENST00000556648 MTUS1Q9ULD2 1270 aa10.76□□□□□ -0.69
TMEM260-211ENST00000556648 LOC102724159A0A0B4J2E5 919 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 SHBGP04278 402 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 RALAP11233 206 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 ARF4P18085 180 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-211ENST00000556648 SLC1A1P43005 524 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 GNGT1P63211 74 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 PWP2Q15269 919 aaKnown RBP10.75□□□□□ -0.69
TMEM260-211ENST00000556648 SURF1Q15526 300 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 GPR162Q16538 588 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 SGO2Q562F6 1265 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 MARCH8Q5T0T0 291 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 MTHFD1LQ6UB35 978 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 LEKR1Q6ZMV7 388 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 NPLOC4Q8TAT6 608 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 CXorf38Q8TB03 319 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 FEZF2Q8TBJ5 459 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 GTF3C2Q8WUA4 911 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-211ENST00000556648 MCEEQ96PE7 176 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 MORF4L1Q9UBU8 362 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 CYTH4Q9UIA0 394 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 IQCA1LA6NCM1 817 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 PI4K2BG5E9Z4 385 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 ITGB3P05106 788 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 MMP3P08254 477 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 FNTAP49354 379 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 IRAK1P51617 712 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 GTF2A2P52657 109 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 IRX5P78411 483 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-211ENST00000556648 KRT17Q04695 432 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 ADCY2Q08462 1091 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 TRIP13Q15645 432 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-211ENST00000556648 TXNRD3NBQ6F5E7 133 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 ANKRD23Q86SG2 305 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 CCDC50Q8IVM0 306 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 NLRP7Q8WX94 980 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-211ENST00000556648 LENG1Q96BZ8 264 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-211ENST00000556648 ACSF2Q96CM8 615 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-211ENST00000556648 MAML3Q96JK9 1138 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 CAPS2Q9BXY5 557 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 NFKBIZQ9BYH8 718 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 DCLK3Q9C098 648 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 LRRC19Q9H756 370 aa10.75□□□□□ -0.69
TMEM260-211ENST00000556648 TMEM191CA6NGB0 347 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 DCDC2CA8MYV0 355 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 ASAP2O43150 1006 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PSTPIP1O43586 416 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 TSPAN1O60635 241 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 RPS6KA5O75582 802 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 IL18RAPO95256 599 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 CD19P15391 556 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 NR1D1P20393 614 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 TMOD1P28289 359 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 SKOR1P84550 965 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 TMEM62Q0P6H9 643 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 GRB14Q14449 540 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 GRIK4Q16099 956 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 FAM187BQ17R55 369 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 SKIDA1Q1XH10 827 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 SLC10A6Q3KNW5 377 aa10.74□□□□□ -0.69
TMEM260-211ENST00000556648 PRAMEF19Q5SWL8 479 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms