RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ADAM17P78536 824 aa19.5■□□□□ 0.71
SDR39U1-220ENST00000556548 GLE1Q53GS7 698 aaKnown RBP19.5■□□□□ 0.71
SDR39U1-220ENST00000556548 TRIM72Q6ZMU5 477 aa19.5■□□□□ 0.71
SDR39U1-220ENST00000556548 C7orf31Q8N865 590 aa19.5■□□□□ 0.71
SDR39U1-220ENST00000556548 TRIB2Q92519 343 aa19.5■□□□□ 0.71
SDR39U1-220ENST00000556548 DPP3Q9NY33 737 aa19.5■□□□□ 0.71
SDR39U1-220ENST00000556548 C17orf102A2RUQ5 167 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 MIF4GDA9UHW6 222 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 SART1O43290 800 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 IGHA2P01877 340 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 PYGMP11217 842 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 EIF4BP23588 611 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 PEX5P50542 639 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 LACTBP83111 547 aaPredicted RBP19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 PURAQ00577 322 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 IRF5Q13568 498 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 MAP9Q49MG5 647 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 GNASQ5JWF2 1037 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 GLRA4Q5JXX5 417 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 CD101Q93033 1021 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 HPDLQ96IR7 371 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 CALR3Q96L12 384 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 AMACRQ9UHK6 382 aa19.49■□□□□ 0.71
SDR39U1-220ENST00000556548 AKAP5P24588 427 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 GRM5P41594 1212 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 CARSP49589 748 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 FLT3LGP49771 235 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 LIN9Q5TKA1 542 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 SLC27A1Q6PCB7 646 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 TRIM11Q96F44 468 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 TWNKQ96RR1 684 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 TRIM6Q9C030 488 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 WNT8AQ9H1J5 351 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 NXF3Q9H4D5 531 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 GPBP1L1Q9HC44 474 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 PIN4Q9Y237 131 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 MYBL1P10243 752 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 DPH6Q7L8W6 267 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 ZMAT2Q96NC0 199 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 ERVK-5Q9HDB9 667 aa19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 AVENQ9NQS1 362 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-220ENST00000556548 MYO1FO00160 1098 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 AOC2O75106 756 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 FCGRTP55899 365 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 CAP1Q01518 475 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 PTP4A2Q12974 167 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 MAMLD1Q13495 774 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 SMC1AQ14683 1233 aaKnown RBP19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 SNX17Q15036 470 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 TERF2Q15554 542 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 KYAT1Q16773 422 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 DCAF4L1Q3SXM0 396 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 NOTUMQ6P988 496 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 CXCL17Q6UXB2 119 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 PHF13Q86YI8 300 aaPredicted RBP19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 WDTC1Q8N5D0 677 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 BCO2Q9BYV7 579 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 CELF4Q9BZC1 486 aaKnown RBP19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 Q9Y3F1 56 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 PRKCZQ05513 592 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 DENND1BQ6P3S1 775 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 IFT20Q8IY31 132 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 CASKIN2Q8WXE0 1202 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 KLK14Q9P0G3 267 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 NFU1Q9UMS0 254 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 PCDHA3Q9Y5H8 950 aa19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 TRIP12Q14669 1992 aaPredicted RBP19.47■□□□□ 0.71
SDR39U1-220ENST00000556548 TMEM88BA6NKF7 163 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 PPEF2O14830 753 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 CTNNA1P35221 906 aaKnown RBP19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 RAD23BP54727 409 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 CDC42EP1Q00587 391 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 CYP4A22Q5TCH4 519 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 SND1Q7KZF4 910 aaKnown RBP eCLIP19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 AENQ8WTP8 325 aaKnown RBP19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 C18orf25Q96B23 403 aaPredicted RBP19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 KATNAL1Q9BW62 490 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 TTC7AQ9ULT0 858 aaPredicted RBP19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 USTQ9Y2C2 406 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 DUSP11O75319 330 aaKnown RBP19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 MMP8P22894 467 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 YWHAEP62258 255 aaKnown RBP19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 RBP5P82980 135 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 WHAMMQ8TF30 809 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 ELOVL4Q9GZR5 314 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 GDF3Q9NR23 364 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 TUBGCP4Q9UGJ1 667 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 C2CD2Q9Y426 696 aa19.46■□□□□ 0.71
SDR39U1-220ENST00000556548 TCRBV7S2A1N4TA0A589 114 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 O00370 1275 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 TLR3O15455 904 aaKnown RBP19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 TTI1O43156 1089 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 RPL7AP62424 266 aaKnown RBP19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 SEL1L2Q5TEA6 688 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 MFSD14CQ5VZR4 134 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 DDX42Q86XP3 938 aaKnown RBP eCLIP19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 SLC4A11Q8NBS3 891 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 TMEM35BQ8NCS4 154 aa19.45■□□□□ 0.7
SDR39U1-220ENST00000556548 RNF39Q9H2S5 420 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms