RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 STXBP4Q6ZWJ1 553 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 USP37Q86T82 979 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 TCEAL8Q8IYN2 117 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 PLCD3Q8N3E9 789 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 TTC9BQ8N6N2 239 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 RDH13Q8NBN7 331 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 PLEKHO2Q8TD55 490 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 ACSF2Q96CM8 615 aaPredicted RBP8.76□□□□□ -1.01
VTI1B-206ENST00000556461 TCEAL4Q96EI5 215 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 PYM1Q9BRP8 204 aaKnown RBP8.76□□□□□ -1.01
VTI1B-206ENST00000556461 RPP25Q9BUL9 199 aaKnown RBP8.76□□□□□ -1.01
VTI1B-206ENST00000556461 MTMR12Q9C0I1 747 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 EPS15L1Q9UBC2 864 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 AFF4Q9UHB7 1163 aaKnown RBP8.76□□□□□ -1.01
VTI1B-206ENST00000556461 AGAP1Q9UPQ3 857 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 SORCS3Q9UPU3 1222 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 INSL5Q9Y5Q6 135 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
VTI1B-206ENST00000556461 UBE4BO95155 1302 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 TCHHQ07283 1943 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 ZNF318Q5VUA4 2279 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 ZNF233A6NK53 670 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 OR6C75A6NL08 312 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 PRRG1O14668 218 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 HCRTO43612 131 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 XYLBO75191 536 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 SOAT2O75908 522 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 RPN1P04843 607 aaKnown RBP8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CYP11A1P05108 521 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 RHOP08100 348 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 ODC1P11926 461 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 LAMP2P13473 410 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CPB1P15086 417 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CEBPBP17676 345 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 ELF1P32519 619 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CCR2P41597 374 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CASP4P49662 377 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 TAF6P49848 677 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CYP24A1Q07973 514 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 TWF1Q12792 350 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 DPYDQ12882 1025 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 DUSP4Q13115 394 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 MTMR3Q13615 1198 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CCDC142Q17RM4 750 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 KNOP1Q1ED39 458 aaKnown RBP8.75□□□□□ -1.01
VTI1B-206ENST00000556461 PABPC1LQ4VXU2 614 aaKnown RBP8.75□□□□□ -1.01
VTI1B-206ENST00000556461 PRSS36Q5K4E3 855 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 TPGS2Q68CL5 300 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 KRBA2Q6ZNG9 492 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 LRRTM3Q86VH5 581 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 OSTM1Q86WC4 334 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 NT5DC4Q86YG4 428 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 HS6ST3Q8IZP7 471 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CSGALNACT2Q8N6G5 542 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 ATAD1Q8NBU5 361 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 ING5Q8WYH8 240 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 FGF13Q92913 245 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 DNAJC25Q9H1X3 360 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 EXOC1Q9NV70 894 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 INTS13Q9NVM9 706 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 CEP72Q9P209 647 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 USP25Q9UHP3 1055 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 L1RE1Q9UN81 338 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 SLC27A5Q9Y2P5 690 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 YIPF1Q9Y548 306 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 ATP6V1DQ9Y5K8 247 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 TSC2P49815 1807 aa8.75□□□□□ -1.01
VTI1B-206ENST00000556461 MTMR11A4FU01 709 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 KPNA7A9QM74 516 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 ANHXE9PGG2 379 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 KIAA0391O15091 583 aaKnown RBP8.74□□□□□ -1.01
VTI1B-206ENST00000556461 MOSPD3O75425 235 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 ZNF202O95125 648 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 LRG1P02750 347 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 KRT19P08727 400 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 DLATP10515 647 aaKnown RBP8.74□□□□□ -1.01
VTI1B-206ENST00000556461 GJA1P17302 382 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 VCPP55072 806 aaKnown RBP8.74□□□□□ -1.01
VTI1B-206ENST00000556461 NUCB2P80303 420 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 BFSP1Q12934 665 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 GPR17Q13304 367 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 TDGQ13569 410 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 HTR4Q13639 388 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 MYBPC2Q14324 1141 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 PSMD6Q15008 389 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 SNRNP35Q16560 246 aaKnown RBP8.74□□□□□ -1.01
VTI1B-206ENST00000556461 SV2CQ496J9 727 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 SLC39A12Q504Y0 691 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 IER5LQ5T953 404 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 CENPPQ6IPU0 288 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 PARM1Q6UWI2 310 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 RTL10Q7L3V2 364 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 BMP8AQ7Z5Y6 402 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 NPAS3Q8IXF0 933 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 C12orf56Q8IXR9 622 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 UBALD2Q8IYN6 164 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 FMR1NBQ8N0W7 255 aaPredicted RBP8.74□□□□□ -1.01
VTI1B-206ENST00000556461 PDCL2Q8N4E4 241 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 SLC44A3Q8N4M1 653 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 XXYLT1Q8NBI6 393 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms