RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ZNF677Q86XU0 584 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 ZNF280BQ86YH2 543 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 CRIPAKQ8N1N5 446 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 OR6B3Q8NGW1 331 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 FAM84AQ96KN4 292 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 TNIP3Q96KP6 325 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 SENP8Q96LD8 212 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 KREMEN1Q96MU8 473 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 RAD9AQ99638 391 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.85□□□□□ -0.833e-9■■■□□ 17.3
ACTN1-218ENST00000556343 NT5C1AQ9BXI3 368 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 CXCL16Q9H2A7 254 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 NRDE2Q9H7Z3 1164 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 GOLGA2P5Q9HBQ8 144 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 RNF19AQ9NV58 838 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 POLIQ9UNA4 740 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 INSL6Q9Y581 213 aa9.85□□□□□ -0.83
ACTN1-218ENST00000556343 NRP1O14786 923 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 DDHD2O94830 711 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 GJB5O95377 273 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 PAEPP09466 180 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 ATP2A2P16615 1042 aaKnown RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 TYMPP19971 482 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 WARSP23381 471 aaKnown RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 PCSK1P29120 753 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 PPM1AP35813 382 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 ASPAP45381 313 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 AFF1P51825 1210 aaKnown RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 KRT83P78385 493 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 DEFB103AP81534 67 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 GOLGA8FQ08AF8 430 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 GOLGA8DPQ0D2H9 430 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 MAPK8IP2Q13387 824 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 BMS1Q14692 1282 aaKnown RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 STILQ15468 1287 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 PAN2Q504Q3 1202 aaKnown RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 C10orf76Q5T2E6 689 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 FAM117BQ6P1L5 589 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 SCARA5Q6ZMJ2 495 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 C16orf59Q7L2K0 433 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 ADGRF2Q8IZF7 708 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 FIBCD1Q8N539 461 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 RBBP8NLQ8NC74 664 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 KAT5Q92993 513 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 ZNF689Q96CS4 500 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 VWCEQ96DN2 955 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 TMEM176AQ96HP8 235 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 HEXIM2Q96MH2 286 aaKnown RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 ZNF558Q96NG5 402 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 OXCT2Q9BYC2 517 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 HAUS4Q9H6D7 363 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 NHEJ1Q9H9Q4 299 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 PUF60Q9UHX1 559 aaKnown RBP9.84□□□□□ -0.83
ACTN1-218ENST00000556343 PCDHB8Q9UN66 801 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 CNTN6Q9UQ52 1028 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 RWDD3Q9Y3V2 267 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 CEP83Q9Y592 693 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 PCDHB12Q9Y5F1 795 aa9.84□□□□□ -0.83
ACTN1-218ENST00000556343 CITO14578 2027 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 SF3B1O75533 1304 aaKnown RBP eCLIP9.83□□□□□ -0.84
ACTN1-218ENST00000556343 A8MXQ7 604 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 RNF225M0QZC1 329 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-218ENST00000556343 M0QZQ0 153 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 PPEF2O14830 753 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 SYN3O14994 580 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 CYP26A1O43174 497 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 GALTP07902 379 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 VDRP11473 427 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 ACO1P21399 889 aaKnown RBP9.83□□□□□ -0.84
ACTN1-218ENST00000556343 FECHP22830 423 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 GNA15P30679 374 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 EIF4A3P38919 411 aaKnown RBP9.83□□□□□ -0.84
ACTN1-218ENST00000556343 AARSP49588 968 aaKnown RBP eCLIP9.83□□□□□ -0.84
ACTN1-218ENST00000556343 CDH8P55286 799 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 BCAR1P56945 870 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 KRT17Q04695 432 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 INCA1Q0VD86 236 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 TRIM72Q6ZMU5 477 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 IRF2BP2Q7Z5L9 587 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 HERC6Q8IVU3 1022 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 SUSD3Q96L08 255 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 AGPAT1Q99943 283 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 GPR88Q9GZN0 384 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 SMYD3Q9H7B4 428 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 SEPT11Q9NVA2 429 aaKnown RBP9.83□□□□□ -0.84
ACTN1-218ENST00000556343 ADAM28Q9UKQ2 775 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 SSX2IPQ9Y2D8 614 aa9.83□□□□□ -0.84
ACTN1-218ENST00000556343 PRG3Q9Y2Y8 225 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-218ENST00000556343 EPN1Q9Y6I3 576 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-218ENST00000556343 TTC3P53804 2025 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 H7C4K7 107 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 SPTLC1O15269 473 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 ZSCAN12O43309 604 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 THAP12O43422 761 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 TLL1O43897 1013 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 CILPO75339 1184 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 CAPN15O75808 1086 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 CYP11A1P05108 521 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 CD19P15391 556 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms