RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 PPEF2O14830 753 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 RPS6KA5O75582 802 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 SEC31AO94979 1220 aaKnown RBP19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 GNRH1P01148 92 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 TCP1P17987 556 aaKnown RBP19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 BRD2P25440 801 aaKnown RBP19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 THPOP40225 353 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 RBP5P82980 135 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 NFX1Q12986 1120 aaKnown RBP19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 ORC1Q13415 861 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 ITGA7Q13683 1181 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 RHOT2Q8IXI1 618 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 SMG8Q8ND04 991 aaKnown RBP19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 ZSWIM1Q9BR11 485 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 PARP2Q9UGN5 583 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 IPPQ9Y573 584 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 CYP1A1P04798 512 aaPredicted RBP19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 ATICP31939 592 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 ZBTB6Q15916 424 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 LONRF2Q1L5Z9 754 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 PEX26Q7Z412 305 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 PHLDB2Q86SQ0 1253 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 NOA1Q8NC60 698 aaKnown RBP19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 MS4A14Q96JA4 679 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 FUT8Q9BYC5 575 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 VRTNQ9H8Y1 702 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 CNTN3Q9P232 1028 aa19.9■□□□□ 0.78
SDR39U1-218ENST00000556262 MGAT3Q09327 533 aa19.89■□□□□ 0.77
SDR39U1-218ENST00000556262 RPS6KA1Q15418 735 aa19.89■□□□□ 0.77
SDR39U1-218ENST00000556262 LHX8Q68G74 356 aa19.89■□□□□ 0.77
SDR39U1-218ENST00000556262 NT5DC3Q86UY8 548 aa19.89■□□□□ 0.77
SDR39U1-218ENST00000556262 ARRDC4Q8NCT1 418 aa19.89■□□□□ 0.77
SDR39U1-218ENST00000556262 TFAP2BQ92481 460 aa19.89■□□□□ 0.77
SDR39U1-218ENST00000556262 HMGXB4Q9UGU5 601 aa19.89■□□□□ 0.77
SDR39U1-218ENST00000556262 DERAQ9Y315 318 aa19.89■□□□□ 0.77
SDR39U1-218ENST00000556262 KIF4AO95239 1232 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 CYP1A2P05177 515 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 NOMO3P69849 1222 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 CENPCQ03188 943 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 LLGL2Q6P1M3 1020 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 WDR93Q6P2C0 686 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 MCOLN2Q8IZK6 566 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 NUP85Q9BW27 656 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 AGO3Q9H9G7 860 aaKnown RBP19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 GTF3C4Q9UKN8 822 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 STXBP5LQ9Y2K9 1186 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 PDCD11Q14690 1871 aaKnown RBP19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 SMIM28A0A1B0GU29 152 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 MAP2K7O14733 419 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 GRK4P32298 578 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 NSFP46459 744 aaKnown RBP19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 SYCE1Q8N0S2 351 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 BTBD6Q96KE9 485 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 TWNKQ96RR1 684 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 HMX1Q9NP08 348 aaPredicted RBP19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 ABCB6Q9NP58 842 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 CNOT8Q9UFF9 292 aaKnown RBP19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 PTCH2Q9Y6C5 1203 aa19.88■□□□□ 0.77
SDR39U1-218ENST00000556262 KCNK3O14649 394 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 SASH3O75995 380 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 YWHAEP62258 255 aaKnown RBP19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 GPS2Q13227 327 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 TCEAL1Q15170 157 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 HDXQ7Z353 690 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 RPAINQ86UA6 219 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 SLAIN1Q8ND83 568 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 BEST2Q8NFU1 509 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 ZNF564Q8TBZ8 553 aaPredicted RBP19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 WHAMMQ8TF30 809 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 NOD1Q9Y239 953 aa19.87■□□□□ 0.77
SDR39U1-218ENST00000556262 MEIS3P2A8K0S8 358 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 TMEM110-MUSTN1A8MSY1 372 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 RAD23BP54727 409 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 HADHBP55084 474 aaKnown RBP19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 BEND6Q5SZJ8 279 aaPredicted RBP19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 TRIM72Q6ZMU5 477 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 SH3TC2Q8TF17 1288 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 TRIM17Q9Y577 477 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 TARSL2A2RTX5 802 aaKnown RBP19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 CABYRO75952 493 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 P4HA1P13674 534 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 CD19P15391 556 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 RRM1P23921 792 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 TNNC1P63316 161 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 MON1BQ7L1V2 547 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 GLT1D1Q96MS3 346 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 C11orf70Q9BRQ4 267 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 ELOVL4Q9GZR5 314 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 GOLGA2P5Q9HBQ8 144 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 AMFRQ9UKV5 643 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 ALG6Q9Y672 507 aa19.86■□□□□ 0.77
SDR39U1-218ENST00000556262 CILPO75339 1184 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 STAU1O95793 577 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 GHRP10912 638 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 CD52P31358 61 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 RNASE9P60153 205 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 C2orf54Q08AI8 447 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 MYO1EQ12965 1108 aa19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 SMC1AQ14683 1233 aaKnown RBP19.85■□□□□ 0.77
SDR39U1-218ENST00000556262 MESDQ14696 234 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms