RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 MAN2B1O00754 1011 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 SPTLC1O15269 473 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 ODC1P11926 461 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 GJA1P17302 382 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 GDI1P31150 447 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 EPHB3P54753 998 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 LILRA4P59901 499 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 CSTF1Q05048 431 aaKnown RBP20.42■□□□□ 0.86
CDKN3-209ENST00000556102 DUSP4Q13115 394 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 FZD5Q13467 585 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 SF3A1Q15459 793 aaKnown RBP20.42■□□□□ 0.86
CDKN3-209ENST00000556102 TEAD2Q15562 447 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 ERMP1Q7Z2K6 904 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 SUMF1Q8NBK3 374 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 SHKBP1Q8TBC3 707 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 ZSCAN18Q8TBC5 510 aaPredicted RBP20.42■□□□□ 0.86
CDKN3-209ENST00000556102 RUBCNQ92622 972 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 HINFPQ9BQA5 517 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 LRRC3Q9BY71 257 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 CRISPLD1Q9H336 500 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 DERAQ9Y315 318 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 PCDHGA2Q9Y5H1 932 aa20.42■□□□□ 0.86
CDKN3-209ENST00000556102 DMXL1Q9Y485 3027 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 NMT1P30419 496 aaKnown RBP20.41■□□□□ 0.86
CDKN3-209ENST00000556102 VIPR2P41587 438 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 ALDH1A3P47895 512 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 TMEM132DQ14C87 1099 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 C9orf57Q5W0N0 161 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 CENPPQ6IPU0 288 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 TMC8Q8IU68 726 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 MFSD6LQ8IWD5 586 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 E2F7Q96AV8 911 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 SENP8Q96LD8 212 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 CCSER1Q9C0I3 900 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 DNAJC25Q9H1X3 360 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 SLITRK6Q9H5Y7 841 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 TCHHQ07283 1943 aa20.41■□□□□ 0.86
CDKN3-209ENST00000556102 MTMR11A4FU01 709 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 ANKRD63C9JTQ0 380 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 NFICP08651 508 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 ARMCX5Q6P1M9 558 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 KIAA2013Q8IYS2 634 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 ZNF687Q8N1G0 1237 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 ST6GALNAC4Q9H4F1 302 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 ASB7Q9H672 318 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 PRMT8Q9NR22 394 aaPredicted RBP20.4■□□□□ 0.86
CDKN3-209ENST00000556102 ZSCAN32Q9NX65 697 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 NDRG2Q9UN36 371 aaKnown RBP20.4■□□□□ 0.86
CDKN3-209ENST00000556102 ASB3Q9Y575 518 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 CACNA1AO00555 2505 aa20.4■□□□□ 0.86
CDKN3-209ENST00000556102 NUP210Q8TEM1 1887 aaPredicted RBP20.39■□□□□ 0.86
CDKN3-209ENST00000556102 NCANO14594 1321 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 A0A1W2PRU2 124 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 ANO9A1A5B4 782 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 HEPACAM2A8MVW5 462 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 PIRO00625 290 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 ZNF263O14978 683 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 CYP11A1P05108 521 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 DDIT3P35638 169 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 ACOT2P49753 483 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 ZC2HC1CQ53FD0 456 aaPredicted RBP20.39■□□□□ 0.85
CDKN3-209ENST00000556102 ADALQ6DHV7 355 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 SLFN12LQ6IEE8 588 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 KRI1Q8N9T8 703 aaKnown RBP20.39■□□□□ 0.85
CDKN3-209ENST00000556102 ATAD1Q8NBU5 361 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 ZBTB44Q8NCP5 570 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 ATRIPQ8WXE1 791 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 NELL1Q92832 810 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 IER2Q9BTL4 223 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 CHRDQ9H2X0 955 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 HSFX1Q9UBD0 423 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 SLC27A5Q9Y2P5 690 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 C2CD2Q9Y426 696 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 STYXL1Q9Y6J8 313 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 PIAS3Q9Y6X2 628 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 CEP250Q9BV73 2442 aa20.39■□□□□ 0.85
CDKN3-209ENST00000556102 MTAPQ13126 283 aa20.38■□□□□ 0.85
CDKN3-209ENST00000556102 TTC9BQ8N6N2 239 aa20.38■□□□□ 0.85
CDKN3-209ENST00000556102 FAM3CQ92520 227 aa20.38■□□□□ 0.85
CDKN3-209ENST00000556102 PSMG2Q969U7 264 aa20.38■□□□□ 0.85
CDKN3-209ENST00000556102 TMEM209Q96SK2 561 aa20.38■□□□□ 0.85
CDKN3-209ENST00000556102 AGO2Q9UKV8 859 aaKnown RBP20.38■□□□□ 0.85
CDKN3-209ENST00000556102 DSEQ9UL01 958 aa20.38■□□□□ 0.85
CDKN3-209ENST00000556102 VPS37CA5D8V6 355 aaPredicted RBP20.37■□□□□ 0.85
CDKN3-209ENST00000556102 TISP43B9A030 160 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 ARNTLO00327 626 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 LILRB5O75023 590 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 FGF19O95750 216 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 POU5F1Q01860 360 aaKnown RBP20.37■□□□□ 0.85
CDKN3-209ENST00000556102 USP49Q70CQ1 688 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 DNAJB7Q7Z6W7 309 aaPredicted RBP20.37■□□□□ 0.85
CDKN3-209ENST00000556102 YAF2Q8IY57 180 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 DCLK2Q8N568 766 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 OR10T2Q8NGX3 314 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 HVCN1Q96D96 273 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 RSPRY1Q96DX4 576 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 EPSTI1Q96J88 318 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 FAM126AQ9BYI3 521 aaPredicted RBP20.37■□□□□ 0.85
CDKN3-209ENST00000556102 STK17AQ9UEE5 414 aa20.37■□□□□ 0.85
CDKN3-209ENST00000556102 CHADO15335 359 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms