RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 DSG1Q02413 1049 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 YWHAHQ04917 246 aaPredicted RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 EXOC3L4Q17RC7 722 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 CBWD6Q4V339 395 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 CBWD3Q5JTY5 395 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 CBWD5Q5RIA9 395 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 OVOS1Q6IE37 1185 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 ZNF280DQ6N043 979 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 RNF168Q8IYW5 571 aaPredicted RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 RNF214Q8ND24 703 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 EHBP1Q8NDI1 1231 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 C3orf58Q8NDZ4 430 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 CXorf38Q8TB03 319 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 BCL7CQ8WUZ0 217 aaPredicted RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 RIN2Q8WYP3 895 aaPredicted RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 PIK3R5Q8WYR1 880 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 MRPL38Q96DV4 380 aaKnown RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 LRCH3Q96II8 777 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 FAM84AQ96KN4 292 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 PCMTD1Q96MG8 357 aaPredicted RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 EMILIN2Q9BXX0 1053 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 GPR62Q9BZJ7 368 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 NIF3L1Q9GZT8 377 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 ZBP1Q9H171 429 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 XYLT2Q9H1B5 865 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 VPS16Q9H269 839 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 SNX25Q9H3E2 840 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 PRDM12Q9H4Q4 367 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 FAM124BQ9H5Z6 455 aaPredicted RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 CYP3A43Q9HB55 503 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 CHST7Q9NS84 486 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 GCNT4Q9P109 453 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 NXF1Q9UBU9 619 aaKnown RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 OR6C75A6NL08 312 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 F8W810 466 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 I3L4J1 428 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 C2CD2LO14523 706 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 SPTLC1O15269 473 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 CBFA2T2O43439 604 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 TACC1O75410 805 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 OAZ2O95190 189 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 EFEMP2O95967 443 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 CYP11A1P05108 521 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 ADH1AP07327 375 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 ATP1A3P13637 1013 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 PCSK1P29120 753 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 TKTP29401 623 aaKnown RBP8.18□□□□□ -1.1
TDP1-214ENST00000556063 FANCCQ00597 558 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 UBXN1Q04323 297 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 PSMD5Q16401 504 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 CTXN3Q4LDR2 81 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 MIIPQ5JXC2 388 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 VARS2Q5ST30 1063 aaKnown RBP8.18□□□□□ -1.1
TDP1-214ENST00000556063 WSCD1Q658N2 575 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 SMYD5Q6GMV2 418 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 ELMSAN1Q6PJG2 1045 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 CD300LGQ6UXG3 332 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 ENOSF1Q7L5Y1 443 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 SPRED2Q7Z698 418 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 PPFIBP1Q86W92 1011 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 ADGRF2Q8IZF7 708 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 MRPL43Q8N983 215 aaKnown RBP8.18□□□□□ -1.1
TDP1-214ENST00000556063 GDPD5Q8WTR4 605 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 CRACR2AQ9BSW2 395 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 PI4K2AQ9BTU6 479 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 INTS2Q9H0H0 1204 aaKnown RBP8.18□□□□□ -1.1
TDP1-214ENST00000556063 HSD3B7Q9H2F3 369 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 TTYH1Q9H313 450 aaPredicted RBP8.18□□□□□ -1.1
TDP1-214ENST00000556063 DAAM1Q9Y4D1 1078 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 BACE2Q9Y5Z0 518 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 IRAK3Q9Y616 596 aa8.18□□□□□ -1.1
TDP1-214ENST00000556063 PLXNA4Q9HCM2 1894 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 RFXAPO00287 272 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 FSCN2O14926 492 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 NCK2O43639 380 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 C1RP00736 705 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 POU3F3P20264 500 aaPredicted RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 RFX1P22670 979 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 IGFBP4P22692 258 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 WARSP23381 471 aaKnown RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 GNL1P36915 607 aaPredicted RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 NDUFV1P49821 464 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 MFAP3P55082 362 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 UBASH3AP57075 661 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 ERVFC1P60507 584 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 TSPY1Q01534 308 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 SMARCB1Q12824 385 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 LRMPQ12912 555 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 GRIN2CQ14957 1233 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 PTPN14Q15678 1187 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 MAPRE1Q15691 268 aaKnown RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 SOWAHAQ2M3V2 549 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 UVSSAQ2YD98 709 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 RTP2Q5QGT7 225 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 KIAA0319Q5VV43 1072 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 PLPP4Q5VZY2 271 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 TRIM65Q6PJ69 517 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 TAS1R1Q7RTX1 841 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 PPM1KQ8N3J5 372 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms