RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 DEPDC1BQ8WUY9 529 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 FAM3CQ92520 227 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 KIF12Q96FN5 646 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 FAM126AQ9BYI3 521 aaPredicted RBP15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ZFHX4Q86UP3 3567 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 K7ESF4 209 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SOAT2O75908 522 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CD2BP2O95400 341 aaKnown RBP15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ZNF131P52739 623 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 STRN3Q13033 797 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ZRSR1Q15695 479 aaKnown RBP15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SPATA1Q5VX52 437 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ATAD1Q8NBU5 361 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 LEMD2Q8NC56 503 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 OR10T2Q8NGX3 314 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 REEP2Q9BRK0 252 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 RBM12Q9NTZ6 932 aaKnown RBP15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 BLOC1S4Q9NUP1 217 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 UBQLN1Q9UMX0 589 aaKnown RBP15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SLC27A5Q9Y2P5 690 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ATG2BQ96BY7 2078 aa15.62■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MAP1BP46821 2468 aaKnown RBP15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 A0A0B4J269 797 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ANO9A1A5B4 782 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 VWA3AA6NCI4 1184 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 TYMPP19971 482 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SMTNP53814 917 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 LILRA4P59901 499 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 GRIN1Q05586 938 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 C8orf34Q49A92 452 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 Q6ZS52 159 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ELMOD1Q8N336 334 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 KCTD17Q8N5Z5 321 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CHFRQ96EP1 664 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 IL21Q9HBE4 155 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 KCND2Q9NZV8 630 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CPSF3Q9UKF6 684 aaKnown RBP15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 TBX20Q9UMR3 447 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SPAG17Q6Q759 2223 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SDK1Q7Z5N4 2213 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 LAMA1P25391 3075 aa15.61■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SLC38A8A6NNN8 435 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 TISP43B9A030 160 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PIRO00625 290 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ZNF263O14978 683 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 OGTO15294 1046 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CHADO15335 359 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 HRO43593 1189 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PRAMEF12O95522 483 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MARCKSP29966 332 aaPredicted RBP15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 LPAL2Q16609 132 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 RILPL1Q5EBL4 403 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 OVOS1Q6IE37 1185 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 JADE1Q6IE81 842 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 DNAJB7Q7Z6W7 309 aaPredicted RBP15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ARID3BQ8IVW6 561 aaPredicted RBP15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PSMG2Q969U7 264 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ZFYVE19Q96K21 471 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SENP8Q96LD8 212 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 IER2Q9BTL4 223 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 OXCT2Q9BYC2 517 aaPredicted RBP15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 IKZF4Q9H2S9 585 aa15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ZNF638Q14966 1978 aaKnown RBP15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CNOT1A5YKK6 2376 aaKnown RBP15.6■□□□□ 0.09
CHMP4BP1-201ENST00000556017 GREB1Q4ZG55 1949 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MYBPHLA2RUH7 354 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 OR6C75A6NL08 312 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PAPSS2O95340 614 aaPredicted RBP15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CYP11A1P05108 521 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 NFICP08651 508 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ATF6P18850 670 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CDR1P51861 262 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PPP2R3AQ06190 1150 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SRSF5Q13243 272 aaKnown RBP15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MYBPC2Q14324 1141 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 C9orf57Q5W0N0 161 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ARL6IP4Q66PJ3 421 aaKnown RBP15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 LRRTM3Q86VH5 581 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 GPR161Q8N6U8 529 aaKnown RBP15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 GPR88Q9GZN0 384 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 GTSE1Q9NYZ3 720 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 LARSQ9P2J5 1176 aaKnown RBP15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 KCNG1Q9UIX4 513 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ODF2LQ9ULJ1 636 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MYO16Q9Y6X6 1858 aa15.59■□□□□ 0.09
CHMP4BP1-201ENST00000556017 USP24Q9UPU5 2620 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 DCDC2BA2VCK2 349 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CHURC1-FNTBB4DL54 471 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 ANKRD63C9JTQ0 380 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 NEFLP07196 543 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CTHP32929 405 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CXCL12P48061 93 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 FNTBP49356 437 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CCR3P51677 355 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 EPHB3P54753 998 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 TNK2Q07912 1038 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SPEM2Q0P670 501 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 CCINQ13939 588 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 SCARA3Q6AZY7 606 aa15.58■□□□□ 0.08
CHMP4BP1-201ENST00000556017 PKN3Q6P5Z2 889 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms